Thiothrix subterranea: HMY34_02770
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Entry
HMY34_02770 CDS
T07831
Name
(GenBank) RHS repeat protein
Organism
tsb
Thiothrix subterranea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6156
Motif
Other DBs
NCBI-ProteinID:
QQZ27762
LinkDB
All DBs
Position
574157..578356
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AA seq
1399 aa
AA seq
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MISRRLLATAVLTALATTACNDNNNNGLNSNDTNATKVASRYYLAPEVAGNSASINGVDV
STGKITYDTNDINTSQLALSRQFSSAGVSPDALGGWQHNYSSSLDAGGISTTEWQGAKSP
EYPDAETACESGWQQISSSAYNGQLQTADAVFNAGLCELKLNGTTVARLPVQGSDGNSSY
PIHILTRSDGSRITFYEQNGEWATTTREPYQLASTANGWNVTTPDGSVESYNLAGKPDSI
TNPQGQTTTLSYGSAGQLEKVTSPFGQSLTFSYTDGKLSEAKSAAGTTTYAYGADGKLSQ
VMLPDGATHSYTYTDGKLDSITDATGAVVARYTYDTEGRVTHTEAAAGTQARAFAYNGAE
TSVTDVVNNTTDTYAHRIIQSLARATRSTDSTGATDTTEYDANGYLIKTVDKNGLITLTT
WNARGLPESTTTAAGTAQARTTVTEWHPQFRKPSKQVEAGNVTLYEYDNEGNLTNKTVGS
PTAATNRLSARGAVTQLQAMRSLSSRAALKSAGYEVQESTIAYNSAGQPTETIAPNGAVT
SYDYDNQGNQITVTNALNHTSKTLEYDAAGRALKTQDENGLVTTNVYDVAGRLTNSNTNG
QTTSYAYDVADRQTQTTYSDGSTSTTAYDNAGNTASTTDAQGTATTYTYDSNGNQLTESL
TDASGNTRQTSRRDYNALNQLEKSTDADGNVTTYGYDKAGNQTSVTDAQGRVTTNEYDAQ
NRLVKTTDPAGGITQYAYDAEGNRTTVIAANGATTTYAYDNFKRMTGETSPDRGNTTNTH
DISGNLKTSTDANGNTATHDYDLLNRKVKTTWQDGSTATYSYDTCTNGISRLCTLTDGSG
STTYQYDNEGRITQKTQTIGSVTLTHRYAYTSDGKLQSEILPSGANVGYTYTQDKLTGIT
LNGQTYMSNIRYNAAGQVSGWQWADGTTYQKTYDANNRLKTFPLGNFTRTLSYDTVGNIT
GWDDNGDAAKAKHFSYDLLDRLDGYTAANEAQVFQYDPNGNRTAKTDNGNATAYGLQANS
NRLTHIGNTAQAQDANGNLLNDGTHAYTYNAQNRLASVDGTTAYTYNTDNQRVKKTSNNG
TTLYAWDNDRIIGEYDGSGTAQQETVYFGNTPVAVIQNGSIHRIYADQIDTPRIITDVTG
KTVWLWESKPFGETAPNEDPDKDGLALRYSQRFPGQTFDAETGLHYNFHRDYNPVTGRYV
QSDPIGLDGGMNSFGYVRENPLIYLDLLGEKTAVIHNGMTSGNPFGHSAIAFTRAGIYSF
GNSTPRASSLIGYTAREMPRRNTTMTIINTTYAQEQRMLSFINRYSGSMESIGYYDNCAY
RTSSTLDKLYQDLSFFQRLSPTPWSPTRFPYEVENIAIKYMKSFGGVRVSVPSYSGTWSQ
QLARVPTVLREFEPVYAGY
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacgccgactactcgccactgcggtactgaccgcgctcgccactactgcctgt
aatgacaataataacaatggtttaaactcaaacgacaccaatgcaaccaaggttgccagc
cgttactaccttgcgccagaagtggcaggaaacagcgcatccattaatggtgttgatgtt
tccacaggaaaaataacgtatgacacaaatgacataaataccagtcaattggcattatcc
cgccaattttcctccgcaggcgtaagccctgacgcattaggcggttggcagcacaactac
agcagcagcctcgatgcaggcggcatctctaccaccgaatggcaaggcgcaaaaagcccc
gaataccccgatgctgaaaccgcttgcgaatctggctggcagcaaatcagcagcagtgcc
tacaacgggcaactgcaaaccgctgatgcggtgttcaacgcgggcttgtgcgaactcaaa
ctcaacggcacaaccgtagcccgtctgcctgtacaaggcagcgacggcaacagcagttac
cccatccacatcctcacccgaagcgatggcagccgcatcaccttctacgaacaaaacggt
gaatgggcaaccaccacccgcgaaccctaccaactggcatccaccgccaacggctggaac
gtcaccacgcctgatggcagcgtagaaagctacaacctcgcaggcaagcccgacagcatc
accaacccacaagggcaaaccactaccctcagctacggcagcgcggggcaactggaaaaa
gtcaccagccccttcgggcaaagcctcactttcagctataccgatggtaaattgagtgaa
gctaaaagtgccgcaggcacgaccacttacgcctacggcgcagacggcaaactgtcacaa
gtcatgctccccgacggcgctacccacagctacacctacaccgacggcaagctcgacagc
atcaccgacgcaacaggcgcagtggttgcccgttacacctacgacaccgaagggcgcgtt
acccacaccgaagcagcggctggcacacaagcccgtgccttcgcctacaacggcgcagaa
accagcgtcactgatgttgtcaataacaccaccgacacctacgcccaccgcattatccaa
agtttggcacgggcaacccgcagcaccgacagcacaggtgcaaccgacaccaccgaatac
gacgcgaacggctacctcatcaaaacggtggacaaaaacggcttaatcaccctgaccaca
tggaacgcccgtggtcttcccgaatccaccaccaccgccgcaggcacagcccaagcccgc
accacggtaacggaatggcatccccaattccgcaaacccagcaaacaagtcgaagcgggc
aacgtcacgctgtacgaatacgacaatgaaggcaatctcaccaacaaaacggtcggcagc
cccacagccgccaccaaccgcctttccgcccgtggagccgttacccagctacaagcgatg
cgcagcctcagcagccgagccgccctcaaatccgcaggctacgaagtccaagaaagtacc
attgcctacaacagtgcagggcaacccacggaaaccattgccccgaatggtgctgtcacc
agctacgactacgacaatcagggcaaccagatcaccgttaccaacgccctcaaccacacc
agcaaaacactggaatatgacgctgctggtcgcgccctcaaaacccaagacgaaaatggt
ctggtcaccaccaacgtctatgatgttgctggacgcttgacaaacagcaacaccaacgga
caaaccaccagctacgcttacgacgtggcagatcgccaaacccaaacgacttactcggat
ggcagcaccagcaccacagcttacgacaacgcaggtaacaccgccagcaccactgacgcg
caaggcactgccaccacctacacttacgacagcaacggcaaccagctaaccgaaagcctc
accgatgccagcggcaacacccgccaaaccagccgccgcgactacaacgccctgaaccaa
ctggaaaagtccactgacgcagacggcaacgtgaccacctacggctacgacaaggcaggc
aaccaaaccagcgtcaccgatgcccaagggcgcgtgaccaccaatgaatacgacgcacaa
aaccgtctggtcaaaaccactgaccccgcaggcggtattacccaatacgcctacgatgcc
gaaggcaaccgcaccaccgttattgctgcgaacggtgcaaccactacttatgcctacgac
aacttcaagcgcatgactggcgaaaccagccccgaccgtggcaataccaccaacacccac
gacatcagcggcaacctcaaaaccagcaccgatgccaacggcaacacggctacccacgac
tacgacctgctcaaccgcaaggtcaaaaccacatggcaggatggcagcaccgccacctac
agctatgacacttgcaccaacggtatcagtaggctctgcaccctcaccgacggcagtggc
agcaccacctaccaatacgacaacgaagggcgcatcacccagaaaacccagaccattggc
agcgtaaccctgacccaccgctacgcctacaccagcgatggcaagctgcaaagcgaaatt
ctccccagtggtgcaaatgttggctacacttacacgcaagacaaactgactgggattacc
ctcaatgggcaaacgtatatgagcaacatccgctacaatgcagcagggcaggtgtcaggc
tggcaatgggcggacggcacgacctaccagaaaacctacgatgccaacaacaggctcaaa
actttcccgctcggcaacttcacccgcaccctcagttatgacactgtaggcaacatcaca
ggttgggacgacaacggcgatgccgccaaagccaagcacttcagctacgatttactcgac
cgcttggacggctacaccgccgccaacgaagcgcaagtcttccaatatgaccccaacggc
aaccgtaccgccaagactgacaacggcaacgccaccgcttacgggcttcaagccaacagc
aaccgcctaacccacatcggcaacacagcccaagcgcaagatgccaacggcaacttgctc
aacgatggcacacatgcctacacctacaacgcgcagaaccgccttgccagtgtggacggc
acaaccgcctacacttacaacactgacaaccagcgggtgaagaaaacttccaacaacggt
acaaccctatacgcatgggacaatgaccgcattattggcgaatatgatggaagcggtaca
gcgcaacaggaaacggtttacttcggtaatacgccagtcgcggtaatccagaacggcagc
attcaccgtatctacgccgaccagattgacaccccacgtatcatcaccgatgtaacaggg
aaaactgtttggttatgggaaagtaaacctttcggtgaaaccgcccccaacgaagatccc
gacaaggatggtttggctctgcgttacagccagcgtttccccggacaaacttttgatgcc
gaaacagggctgcattataacttccaccgtgactacaaccctgtaaccgggcgatatgta
cagtccgacccaattggactggatgggggaatgaattcatttgggtatgtgagggagaat
ccactgatatatctcgacctacttggagagaagacagcggttattcataatgggatgaca
tcaggaaatccatttgggcattcggctatagcttttacaagggcagggatttatagtttc
ggaaactccacaccacgagcttcatctttgatagggtatacggcaagggaaatgcctcgt
agaaatacaacgatgacaattataaatacaacatatgcgcaagagcaaagaatgctttct
tttatcaaccgttattctggtagcatggagagcattggttattatgataattgcgcatat
agaacttcttctacattagataagttgtaccaagatttgagcttttttcaaagattatca
ccgaccccttggagtccaactagatttccttatgaggttgaaaatattgccattaagtat
atgaagtcattcggtggagtaagggttagtgttccttcttatagtggaacatggagtcaa
caacttgctcgagtgccaacagtattacgtgagtttgaaccagtttacgcaggttactga
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