Thiothrix subterranea: HMY34_03400
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Entry
HMY34_03400 CDS
T07831
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
HMY34_03400
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Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CALCOCO1
DUF7032
CusB_dom_1
WEMBL
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QQZ27874
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Position
complement(717684..719021)
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AA seq
445 aa
AA seq
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MSNPINSTTNDSVKAVLAAGGKKKSQGSKGKWLLALLVAGIIAGGAGYYFMGSSQTKSQT
SYKTTPAKTGNLSVTVTATGNLQPKNQVDIGTELSGTVDDVLVDANEVVKKGQKLASLNT
TQLQDTITKGKASLASAQAKVKQSAASVKEARTKLNRLRELYSASGGKLPAKSELDTAEA
TLERSQADAEVAKTTVISATAELRSSETNLGKAIITSPINGVVLTRTVEPGQTVASSLSA
PTLFTLAEDLAQMEVEVGVDEADVGQVKAGQKAEFSVDAWPGRKYPAEITRVSLGANTSE
NVVSYLTVLAVQNTDLTLRPGMTATATIKTESRENVLLVPNTALRFTPVVAAAPAAASAN
SSFISQLMPRPPGMGTAKKRPNGTPPVASPDGMQKIWVLDNNAPLAVEVKTGISDGKQTE
IVSGDLKEGMAVITESTGGTTGGTP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccaatcaattcaaccaccaacgattccgtcaaagcggtattggcagcaggc
ggtaaaaagaaatctcaaggcagcaagggcaagtggctcttggcactgctggtcgcgggg
atcatcgcaggcggcgcaggctattacttcatggggtcatcccaaaccaagagccaaacc
agctacaaaaccacccccgccaaaaccggcaacctcagcgtcacggtgacggcgacaggc
aacttgcaacccaaaaatcaagtcgatattggcacggaactctccggcacagttgatgac
gtactggtggatgccaacgaagtagtgaaaaaagggcagaaactcgccagcctcaacacc
acccagttgcaagacaccattaccaaaggcaaagcgtcgctggcatccgcgcaagccaaa
gtcaaacaatccgcagccagcgtcaaagaagcgcgtaccaagctcaaccgtttacgcgag
ttgtacagcgcctccggcggtaaattgcccgccaaatctgagttggataccgccgaagcg
acgctggaacgttcccaagccgatgccgaagtcgccaaaaccaccgtgatttctgccact
gccgaattgcgttcctccgaaaccaatctcggcaaagccattatcacctcaccgattaac
ggcgtagtgctaacccgcaccgtcgaaccggggcaaaccgtcgcttcgtctttgtccgcg
ccaaccttgttcacactggcggaagatttggcacaaatggaagtcgaagtcggcgtggat
gaagccgatgtcgggcaagtcaaagctggacaaaaagccgaattcagcgtggatgcatgg
ccggggcgcaaataccccgccgaaattacccgcgtcagtctgggagcgaatacctctgaa
aatgtggtgtcctacctcaccgtgctggcggtgcaaaacaccgacctgaccttacgcccc
ggcatgaccgccaccgctaccatcaaaaccgaatcgcgggaaaatgtattgctagtgccg
aatactgctctgcgctttaccccagtagtggctgctgcacctgctgcggcgagcgccaat
agcagcttcatttcacaattgatgccacgtccgccgggtatggggacagccaaaaaacgc
cccaatggtacgccacccgtcgccagccccgatgggatgcaaaaaatctgggtactggac
aataacgcgcccctggcggtggaagtcaaaaccggcattagcgatggcaagcaaaccgaa
atcgttagcggcgacttgaaagaaggaatggcggtgattaccgaaagcacaggcggtaca
acaggtggcacaccatga
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