Thiothrix subterranea: HMY34_03495
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Entry
HMY34_03495 CDS
T07831
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsb03016
]
HMY34_03495 (truB)
Enzymes [BR:
tsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMY34_03495 (truB)
Transfer RNA biogenesis [BR:
tsb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMY34_03495 (truB)
Prokaryotic type
HMY34_03495 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QQZ27892
LinkDB
All DBs
Position
complement(739390..740328)
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AA seq
312 aa
AA seq
DB search
MSKRRFRKLNGILLLDKGLGVSSNKALQDARFLFQAEKAGHTGSLDPLASGMLPVCFGEA
TKVSAYLLDSDKRYLTTATLGYVSTTGDAEGEKLNPRPIPEISDALLEAVLAQFRGEISQ
IPPMYSALKKDGQPLYKLARQGVEVERAARAVTIHALQVLSRTADTLTLDVVCSKGTYIR
TLVEDIGEKLGCGAYVSMLRRESVEPFGASRMYTLEELRALEKDPEALDALLLPLDVALP
HLPAITVAEAVIVRLRQGQKVRTDDADAELLRLYSEFGEFIGLGAAINGVIIPRRLLAYS
VADELTAPCAGT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaagcggcgttttcgcaaactgaatggcattttattgctggataaaggcctaggc
gtatccagcaataaagcgttacaagatgcacgtttcctcttccaagcggaaaaagccggg
cataccggcagtctcgatccgctggcttctggcatgttgccagtctgttttggcgaagcc
accaaggtttctgcctatctactcgattccgacaagcgttatctgaccaccgcaacactg
gggtatgtgagtaccacgggtgatgcggaaggtgaaaagctcaatccgcgccccattcct
gagattagcgatgcgctgcttgaagcggtgttggcgcaattccgtggcgagattagccaa
attcccccgatgtattccgcgctgaaaaaagacgggcaaccgctctataagctggcgcgg
caaggcgtggaagtggaacgtgccgcgcgtgcggtgacgattcatgcgctgcaagtgttg
tcacgcaccgccgatacgctaacgttggacgtggtatgcagcaaaggcacgtacattcgc
acattggtggaagacattggcgaaaagctgggttgtggcgcgtatgtttcgatgctgcgg
cgtgaatcggttgaaccgtttggcgcatcccgcatgtacaccttggaagaattacgggcg
ctggaaaaagatcctgaggctttggatgcattattgttgccgctggatgtcgctttaccg
cacttacccgcgatcacggtggctgaagcggtgattgtgcgcttgcgtcaggggcaaaaa
gtgcgtaccgacgatgccgacgccgaattgctgcgtttatacagcgaattcggcgaattc
atcggcttgggtgcagccattaacggagtaattatcccccggcgcttattggcgtattct
gtggcggatgagctcacagccccatgtgcaggtacttga
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