Thiothrix subterranea: HMY34_03635
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Entry
HMY34_03635 CDS
T07831
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsb03009
]
HMY34_03635 (rlmE)
Enzymes [BR:
tsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
HMY34_03635 (rlmE)
Ribosome biogenesis [BR:
tsb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMY34_03635 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QQZ27918
LinkDB
All DBs
Position
complement(766524..767144)
Genome browser
AA seq
206 aa
AA seq
DB search
MARSKSSQRWLGEHFSDEYVKKAQQEGYRSRAVYKLQEIQEKDRILQPGMKVVDLGAAPG
GWSQYATKFVGQKGRIVASDILPLDPLPFVEFVLGDFREESVLMEMLNLLGGDKADLVIS
DMAPNMSGVDAVDQPRSIHLCELAFDMARQVLKPGGTFLVKLFQGDGSEGFLREVRSSFK
TVKVRKPAASRPRSREVYILAQGFVL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagcaaaagcagtcaaaggtggctgggcgaacattttagtgatgaatacgtc
aaaaaagcacagcaagaagggtaccgttcgcgtgcagtatataaattgcaggaaattcag
gagaaagatcgcattctacagcccggcatgaaagtagtggatttgggtgcagctcccggc
ggatggagccagtacgccaccaagtttgtcgggcaaaaagggcggattgtggcgagtgac
atcttgccgctggatccgttaccttttgtggaatttgtgttaggggattttcgtgaagaa
tctgtcctgatggaaatgctgaatttactcggtggcgataaagcagatcttgttatttcg
gatatggcacccaatatgagtggagtcgatgcagttgatcagccacgttccattcatctg
tgtgaacttgcattcgatatggcgcgtcaggtattaaagccaggtggcacttttctggtg
aaactgtttcagggcgatggctcagaaggcttccttcgcgaagtgcgcagcagctttaaa
acagtaaaagtaaggaaaccggcggcatcaagaccacgcagccgggaggtttatatatta
gcgcaaggttttgtgttgtaa
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