Thiothrix subterranea: HMY34_03975
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Entry
HMY34_03975 CDS
T07831
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb03030
DNA replication
tsb03430
Mismatch repair
tsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMY34_03975 (dnaX)
03430 Mismatch repair
HMY34_03975 (dnaX)
03440 Homologous recombination
HMY34_03975 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsb03032
]
HMY34_03975 (dnaX)
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_03975 (dnaX)
Enzymes [BR:
tsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMY34_03975 (dnaX)
DNA replication proteins [BR:
tsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMY34_03975 (dnaX)
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMY34_03975 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
AAA_16
AAA_assoc_2
AAA_2
AAA_18
AAA_19
DUF3646
Mg_chelatase
Adeno_E1B_55K_N
AAA_30
TsaE
AAA_24
Rad17
nSTAND3
Herpes_Helicase
zf-CXXC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QQZ27980
LinkDB
All DBs
Position
complement(837420..839096)
Genome browser
AA seq
558 aa
AA seq
DB search
MSYQVLARKWRPQDFQQMVGQAHVLRALMNALEGDDGQQRLHHAYLFTGTRGVGKTTLAR
IFAKCLNCETGVTAKPCGECRSCREIAEGRHVDLIEVDAASRTKVEDTRDLLDNVQYAPT
RGRFKIYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLK
RMPVDMISGHLANVLEQENIPFSESALRLLARAADGSMRDALSLTDQAIVAGGGAVSEDE
VQDMLGLLPHEHLLALLQAVADDDGARMLATVEQMAQLTTDFTAAADGFIALLHSIAVQQ
VVPADEADADIAQMAKLLSPADVQLYYQMALYGRRDLPLAPDPRGGFEMLLLRMLAFRLD
DGKSQPHSTPVEKKKIVVETVVDDAQGRDAKSCVSTAVVEAVKLPVHVDMGRDAKSCVST
AVVEAASVLSSNDWHTIYPQLNLSGMALPLAQHCLLESVTDDQITLLLDESGATLQSESA
EAQLAAALAKHYGRSLKLKFHISAISEETPEKRILREAAEQQQAAEAAINNDPFVQQLQE
AFGAVIVPGSIRPRTNAG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtacttgctcgaaaatggcggcctcaggacttccagcaaatggtgggt
caggcgcacgtattgcgagccttgatgaacgccttggaaggcgatgatggtcagcaacgg
ctgcaccatgcctatttgttcaccggcactcgtggggtagggaagacgacgcttgcccga
atctttgccaaatgcctcaactgcgaaaccggtgttaccgccaagccgtgtggggaatgt
cgcagttgccgtgaaattgccgagggtcgtcacgttgacctgatcgaagtcgatgccgca
tcacgcaccaaggtcgaagatacccgcgatttattagacaatgtgcaatacgcgccgact
cgtggacgtttcaagatttacctgatcgacgaagttcacatgctctccgggcacagcttc
aacgcgctgttgaagacgctggaagagccaccgccgcacgtcaaattcctgtttgccacc
actgatccgcagaaattaccggtcacgattttgtcgcgttgcttgcaattcaatctgaaa
cgaatgccggtggatatgatcagcgggcatttggcgaatgtgttggagcaggaaaatatt
cccttcagcgaaagcgccttgcgcttattggcgcgggcggcagatggcagtatgcgcgat
gcgctgagcttgaccgatcaggcaattgttgccggtggcggggcagtgagcgaagacgaa
gtgcaggatatgctgggcttgttgccgcacgagcatttactcgccttgttgcaagccgtc
gccgatgatgacggtgcgcggatgttggcaacggtggagcaaatggcgcaactcaccacc
gattttacggcggcggcagatggtttcattgcattgttgcatagcatagcagtgcagcaa
gtcgtgccagccgatgaagcggatgcggatattgcgcagatggcgaaattgctgtcaccg
gcagatgtgcaattgtactaccagatggccttgtatgggcggcgggatttgcccttagcg
cctgatccgcgcggcggctttgaaatgctgctgttgcgaatgttggcgttccggctggat
gatggcaaatctcaaccacactcgacgccggtcgagaaaaaaaaaattgtagttgaaaca
gttgtcgatgatgcgcagggtagagacgcaaaatcttgcgtatctacggcggtggttgag
gccgtgaaattgccggtgcatgtggatatgggtagagacgcaaaatcttgcgtctctacg
gcggtggttgaagcggcgtccgttttgtccagcaatgattggcacacaatctacccccaa
ctcaacctttccggcatggcgctgccactagcgcaacattgtttgctggaaagcgttacc
gacgatcaaattacgttgttgttagatgaaagtggcgcaacgctgcaaagcgaatctgct
gaggcgcaattagcagcggcattggcaaaacattacgggcgttcgctcaagttaaaattt
cacatcagtgccataagcgaagaaaccccagaaaagcgcatcctgcgcgaagctgcggaa
cagcagcaggcagccgaagcagcgattaacaacgaccccttcgtgcagcaattacaggaa
gcgtttggcgcagttatcgtaccgggcagcatccgcccgcgcacaaatgccggttag
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