Thiothrix subterranea: HMY34_04040
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Entry
HMY34_04040 CDS
T07831
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMY34_04040
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsb01007
]
HMY34_04040
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsb03016
]
HMY34_04040
03029 Mitochondrial biogenesis [BR:
tsb03029
]
HMY34_04040
Enzymes [BR:
tsb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
HMY34_04040
Amino acid related enzymes [BR:
tsb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HMY34_04040
Transfer RNA biogenesis [BR:
tsb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMY34_04040
Prokaryotic type
HMY34_04040
Mitochondrial biogenesis [BR:
tsb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HMY34_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
SYY_C-terminal
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
QQZ27987
LinkDB
All DBs
Position
complement(852754..853953)
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AA seq
399 aa
AA seq
DB search
MDDVADLMQELVRGCEEVLVKAELVAKLKKGKPLRIKAGFDPTAPDLHLGHTVLINKMRQ
FQDAGHQILFLIGDFTGMIGDPTGKSTTRPPLTVEQVQQNSLTYQEQIFKILDPDKTEIM
FNSAWMNQLGSAGLIQLAAKQTVARMLERDDFTKRYKSGQSIAIHEFLYPLVQGYDSVAM
KADVELGGTDQKFNLLMGRDLQRQYGQEQQVVMTMPLLEGLDGVNKMSKSLGNYIGITDA
PNDMFGKIMSISDELMWRYFELLSFRPLTELKRFRQDVEQGANPRDLKFLLAEELIARFH
SQAAAVGAREDFIARFQKGAMPDEMDEISLVAEGAGMPIASLLKAAGLIGSTSDALRMIQ
QGGVKVDGIKIEDRNLLIEKGITAVFQVGKRKFAKITLA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgttgctgacctgatgcaagagctggtacgtggctgtgaagaggtgttggtc
aaagccgaattggtggcgaaacttaaaaaaggtaagccacttaggataaaagcgggtttc
gatccaactgcgcctgatttgcatctggggcataccgtgctcattaataagatgagacag
tttcaggatgccggacaccagattttatttctgatcggtgattttacggggatgatcggc
gatccaaccggaaaatctaccacgcgcccgccgttgacggttgaacaggtgcaacaaaat
tccctgacgtatcaagaacagattttcaagattcttgaccccgacaaaaccgagatcatg
tttaactcggcgtggatgaatcagttaggcagtgcgggcttgattcaattggctgctaaa
caaacggtggcgcggatgttggaacgtgatgatttcaccaaacgctacaaatcggggcag
tccattgcgattcatgaattcctctacccattggtgcaaggctacgattcggtggcgatg
aaggccgatgtggagctgggtggcacggatcagaagtttaatctgctgatgggacgtgat
ttacagcgtcaatacgggcaggaacagcaggtggtgatgaccatgccattgctcgaaggc
ttggatggcgttaataaaatgtctaagtcgttaggtaactacattggtattactgacgcg
cctaacgatatgtttggcaagatcatgtcgatctcggatgagttgatgtggcggtacttt
gaattattgagcttccgcccactcactgagctgaagaggtttaggcaggatgtggaacaa
ggggcgaatccgcgtgacctcaaattcctgttggcggaagagttgattgcgcgtttccat
agtcaggcggcggcagtcggggcgcgtgaagacttcattgcgcgtttccagaagggtgcg
atgccggatgaaatggacgaaattagcctcgttgctgaaggcgcaggaatgccaattgcg
tcattattgaaagcggcaggcttaattggtagtacgtcggatgcgctgcggatgattcaa
cagggtggcgtgaaagtcgatggcatcaagattgaagaccgtaatcttttgattgaaaag
ggaatcacggctgtcttccaagtaggcaagcgtaagttcgccaaaataaccttggcttaa
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