Thiothrix subterranea: HMY34_05045
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Entry
HMY34_05045 CDS
T07831
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_05045 (radA)
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMY34_05045 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_22
DUF7125
Lon_C
AAA_16
AAA_14
Rad51
DnaB_C
nSTAND3
AAA_24
SLFN-g3_helicase
nSTAND_NTPase5
NTPase_1
MCM
AAA
AAA_5
AAA_19
T2SSE
ABC_tran
NACHT
Motif
Other DBs
NCBI-ProteinID:
QQZ28171
LinkDB
All DBs
Position
1056354..1057718
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AA seq
454 aa
AA seq
DB search
MSKVKLQYHCTACGSLHPKWSGQCGECGAWNTMEESISLPASKQAANQRAGGYAGETAVI
RSLNEVSLSEAPRILTHQPELDRVLGGGLVSGSVVLIGGDPGIGKSTILLQTLATLTEMK
TLYVTGEESLQQVGLRAKRLGLPSDHLRLLTETCVETILSLVVQEKPQLMVIDSIQTVFT
DSLQAAPGSVSQIRESAAKLVRFAKQTNTAMFLVGHVTKEGTLAGPRVLEHMVDTVLYFE
GDPGGRYRIIRAVKNRFGAVNELGVFAMTEQGLKGVSNPSAIFLSRHEEPVSGSVIMVTR
EGTRPLMVEVQALVDQSHGAVPRRVTLGLEQNRLAMLLAVLHRHAGISMFDQDVFINVVG
GVKISETAADLSLLLAALSSFRNRPLPADLVVFGEVGLAGEIRPVPNGEERLREAAKHGF
KQAIVAKGNKPRHPIEGMKVVAIARLEKAIEIVM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtcaagcttcaataccactgcaccgcctgcggcagtctgcaccccaaatgg
agcgggcaatgcggtgaatgcggtgcatggaatacgatggaggaaagcataagcctaccc
gcaagcaagcaagcagccaatcaacgggcggggggctacgcgggtgaaaccgccgtgatt
cgctccctcaacgaagtgagcttaagtgaagcaccgcgcatcctcacccaccaacccgaa
ctggatcgggtactcggcggcggactagtgtcaggctcggtggtactcatcggtggcgac
cccggcattggcaaatccaccattttgctgcaaacgcttgccactttaaccgaaatgaaa
accctgtacgtgaccggcgaagaatcgctgcaacaagtgggcttacgtgccaaacgttta
gggctacccagcgaccacttgcgcctgctcaccgaaacctgtgtggaaaccatcctcagt
ttggtggtgcaagaaaaaccgcagttgatggtgattgactctatccaaaccgtgtttacc
gacagcttgcaagcggcgcccggttcggttagccaaatccgcgaatcagcggctaaactg
gtgcgtttcgctaagcaaaccaataccgccatgtttctggtcggtcatgtcaccaaagaa
ggcacactggcagggccgcgtgtccttgaacacatggtcgataccgtgctgtattttgaa
ggcgaccctggcggacgttaccgcattattcgcgccgtcaaaaaccgtttcggcgcggtc
aacgaacttggcgtattcgccatgaccgaacaaggcttgaaaggtgtcagcaacccgtcc
gctattttcctgtcacgccacgaagaacccgtttccggcagtgtcatcatggtcacacgc
gaaggcacacgcccactcatggtggaagtgcaagcgctggtcgaccaaagtcacggtgca
gtaccgcgtcgcgtgaccttgggactggaacaaaatcgcctcgcgatgttgctggccgtg
ctgcataggcacgccggaatctcaatgtttgaccaagacgtattcattaatgttgtcggt
ggtgttaagatttcggaaaccgctgctgatttatcattgttgttagcggcactttcaagt
tttcgcaaccgtcctctgcctgctgatctggtggtttttggagaagttgggctggctggc
gaaattcgcccagttccaaacggtgaggagcgtttgcgtgaggctgccaaacacggtttt
aaacaggctatcgtagcgaaaggaaacaagccacgtcacccgattgaggggatgaaagtg
gtcgccattgccagattggagaaagcgatagaaattgtgatgtaa
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