Thiothrix subterranea: HMY34_05180
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Entry
HMY34_05180 CDS
T07831
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00730
Thiamine metabolism
tsb01100
Metabolic pathways
tsb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HMY34_05180 (thiC)
Enzymes [BR:
tsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HMY34_05180 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QQZ28196
LinkDB
All DBs
Position
1085721..1087610
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AA seq
629 aa
AA seq
DB search
MSAIPAAFLKKTAELSSEVTQPFPNSRKVYVQGSRADLRVGMREIDQDPTAASFGAEENP
PIPVYDTSGPFTDPAVSINLMEGIPDVRLNWILERNDTEQLDGPTSDFGLARQNDPKLAH
LRFAHLRAPRRAKAGKNVSQMHYARQGTITPEMEYVAIRENLRLQELRADPRYSKLLRQH
GGQAWGANLPAEVTPEFVRKEVAEGRAIIPANINHPELEPMIIGRNFRVKINTNIGNSAV
SSSIEEEVEKMAWSARWGGDTLMDLSTGKNIHETREWILRNAPMPIGTVPIYQALEKVNG
KAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTAERLTGIVSRGGSIMAKWCLA
HHQENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSAADANDEAQFAELETLGELTKIAWQ
HDVQVMIEGPGHVPLHMVKENMDKELQDCFEAPFYTLGPLVTDIAPGYDHITSGIGAANI
GWYGCAMLCYVTPKEHLGLPNKEDVRVGIITYKIAAHAADLAKGWPGAQVRDNAMSKARF
EFRWEDQFNLGLDPDRAREYHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVRDYAAKQG
VDAQAALQKGMEEKAVEFIKTGGKLYHQA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaatacctgcggccttcttgaaaaaaacggctgaattgtctagcgaagtcacc
caacccttccctaattcccgtaaggtttacgtgcaaggttcacgcgccgacctccgcgtg
ggaatgcgtgaaatcgaccaagaccctaccgccgccagctttggtgcagaagaaaatcca
ccgattccggtatatgacacctccggcccgttcaccgaccccgccgtcagcatcaatctg
atggaaggcatccccgatgtgcgcctcaactggattttggagcgcaatgataccgaacaa
ctcgacggccccacttcggattttggcctagcccgccaaaacgacccaaaactggcacac
ttacgttttgcacaccttcgcgccccgcgtcgcgccaaagcgggcaaaaacgtctcgcaa
atgcactacgcccgccaaggcacgatcaccccggaaatggaatacgtcgccatccgcgaa
aacttgcggttgcaagaattacgcgctgacccgcgttatagcaaattgctacgccagcac
ggtggacaagcttggggtgcaaacctacctgcggaagtcactcccgaattcgtgcgcaaa
gaagtggcggaaggccgcgccatcattcctgccaatatcaatcaccccgaacttgagccg
atgattatcgggcgcaatttccgcgtcaaaatcaacaccaatatcggcaactcagcagtt
tcctcgtccatcgaggaagaagtcgaaaaaatggcatggtcggcacgttggggcggcgat
accttaatggatttatccactggcaaaaatattcacgaaacccgcgaatggattctgcgc
aatgcgccgatgcccatcggcacagtgcctatttatcaagcgctggaaaaagtgaatggc
aaagccgaagacctcacttgggaaatcttccgcgacaccctgatcgaacaagccgaacaa
ggcgtggattattttactatccacgcaggcgtgcgcttagcctacgttccaatgaccgcc
gaacgcttgaccggtatcgtgtcacgtggcggctcaatcatggcgaaatggtgcttggca
catcaccaagaaaacttcctgtacacgcattttgaagacatctgcgagatcatgaaggct
tacgacgtgagcttctcactgggtgacggcttacgccccggttctgctgcggatgccaac
gatgaggcgcaatttgctgaactggaaaccttgggtgaattgaccaaaattgcttggcaa
cacgacgtgcaagtgatgatcgaaggccctggtcacgtgccgttgcacatggtcaaagag
aatatggacaaggaattgcaggattgctttgaagcgccgttctataccttggggccattg
gtcacggacattgcacccggttacgaccacatcacctccggcattggtgcggcaaatatc
ggctggtacggttgcgcgatgttgtgctacgtcaccccgaaagaacatttaggcttgccg
aataaggaagatgtgcgcgtcggcattatcacctacaaaattgcggcacacgcggcggat
ttggcgaaaggctggccgggcgcacaagtacgtgataacgccatgtcaaaagcacgtttc
gagttccgctgggaagaccagttcaatctggggctagacccggatcgggcgcgtgaatat
cacgatgaaaccttgccgaaagattccgcgaaagtggcgcatttctgctccatgtgtggc
ccacatttctgctcgatgaaaatcacccaagacgtgcgtgattacgccgctaaacaaggt
gtggacgcgcaagcagcgctacaaaaaggcatggaggaaaaagcggtggaattcatcaaa
accggtggaaagttgtatcaccaagcttaa
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