Thiothrix subterranea: HMY34_05270
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Entry
HMY34_05270 CDS
T07831
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tsb03110
]
HMY34_05270 (clpB)
Chaperones and folding catalysts [BR:
tsb03110
]
Heat shock proteins
HSP100
HMY34_05270 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
IstB_IS21
nSTAND3
AAA_24
bpMoxR
AAA_14
DUF815
TsaE
AAA_7
Mg_chelatase
RsgA_GTPase
TniB
NACHT
NBD_SMAX1
DNA_pol3_delta2
T2SSE
AAA_23
Rep_4
DUF5798
Motif
Other DBs
NCBI-ProteinID:
QQZ28212
LinkDB
All DBs
Position
1106896..1109508
Genome browser
AA seq
870 aa
AA seq
DB search
MRMDKLTSKFQLALQDAQSLALGRDHQFIEPAHLMIALLDQEGGSTRGLLTKADVNANQL
RSKLGEALDRMSSVSGGDAGSVHVSNDLSKLLNVTDKIAQQRKDQYISSELFILAGLEDK
GTLGNLLRECGATKGAVEKAIEGMRGGQTVNDPNAEDQRQALDKYTIDLTERAEQGKIDP
IIGRDEEIRRMVQILQRRTKNNPVLIGEPGVGKTALVEGLAQRIVNGEVSEGMKGKRLLS
LDLGALLAGTKYRGDFEERLKAVLNDIAKANGNIILFIDELHTMVGAGKADGAMDAGNML
KPALARGELHCLGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLQEKYEV
HHGVEITDPALVAAATLSHRYITDRQLPDKAIDLIDEAASRIRVEIDSKPEVIDKLDRRL
IQLKIEREALKKESDDASKKRLADLQAEIDRLEIESADLEEIWKSEKADVQGTSHIKEAL
DQARLEFETARRAGNLQRMAELQYGRIPELESQLAQADDAAAHTESKAPKLLKTKVTEDE
IADIVSRWTGIPVSKMLEGEKDKLLKMEEVLAKRVIGQTEAVVAVSNAIRRARAGLSDPN
RPSGSFLFLGPTGVGKTELTKALATFLFDTDDAMVRIDMSEFMEKHSVARLIGAPPGYVG
YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVII
MTSNLGSHLIQEMAGEANYERMKAAVMEVVGTHFRPEFINRIDETVVFHPLDQAEIRQIA
DIQLNNLRKRLAARDLGIQITDAALDLLAEAGFDPVYGARPLKRAIQQQVENPLAQQILG
GKFMPGDTIAVGVEEGRLTFMALVEADETV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggacaaactcaccagcaagttccaactcgccctgcaagacgcgcaatcgctc
gcgttagggcgtgatcaccaattcatcgaacccgcccacttaatgatcgcactgctcgat
caagaaggcggttcgacacgcggtttgctcaccaaagccgatgtcaatgccaaccaattg
cgctccaaactcggcgaagccctcgaccggatgtcatccgtctccggcggcgatgcaggc
agcgtccacgtatccaacgacctcagcaaactgctgaacgttaccgacaaaattgcccag
caacgcaaagaccaatacatttcctccgaactcttcatcctcgccggactggaagacaaa
ggcacgctcggcaatcttctgcgtgaatgcggcgcgaccaaaggcgcggtggaaaaagcc
atcgaagggatgcgtggcggtcaaaccgtcaacgaccccaacgccgaagaccaacgccaa
gccctcgacaaatacaccatcgacctcaccgaacgtgccgaacagggcaagatcgacccg
atcatcgggcgtgacgaagaaatccgccgcatggtgcaaatcctgcaacgccgcaccaaa
aataacccggtgctgatcggcgaacccggcgtgggtaaaaccgcactggtcgaaggcttg
gcgcaacgcatcgtcaacggcgaagtctccgaaggcatgaaaggcaaacgcctgctctcg
ctcgaccttggcgcattgctcgcaggcacaaaataccggggtgactttgaagaacgcctc
aaagccgtgctcaacgacatcgccaaagccaacggcaatatcatcctgttcatcgacgaa
ttacacacgatggtcggcgcaggcaaagccgacggcgcgatggacgctggcaacatgctc
aagcccgcccttgctcgcggcgaattgcactgcctcggcgcaaccacgctcgacgaatac
cgccaatacatcgaaaaagatgccgcactcgaacgccgcttccagaaagtgctggtcgat
gaaccaaccgtagaagacaccatcgccatcctgcgcggcttgcaggaaaaatacgaagtg
catcacggcgtggaaatcaccgaccccgcgctggtcgcagccgccacgctgtcacaccgt
tacatcaccgaccgccagttgccggacaaagccatcgacttgattgacgaagccgcatcc
cgcatccgcgtcgaaatcgactccaagccggaagtaatcgacaagctcgaccgccgcctg
atccagctcaagattgagcgcgaagccttgaaaaaggaatccgacgacgcttccaaaaag
cgtcttgccgacttgcaggctgaaatcgaccgtctggaaatcgaatccgccgatttggaa
gaaatctggaaaagcgaaaaagccgacgtgcaaggcacttcccacatcaaggaagccctc
gaccaagcgcggctcgaatttgaaaccgcccgacgtgcaggcaatttgcaacgcatggcg
gaactgcaatacgggcgcatccccgaactcgaaagccagttggcacaagccgacgatgcc
gccgcccacaccgaatccaaagcacccaagttgctgaaaaccaaggtgacggaagacgaa
attgccgacatcgtgtcacgctggacaggcatcccggtcagcaaaatgctcgaaggcgaa
aaggacaagctactgaaaatggaagaggtgcttgctaagcgcgtgattgggcaaaccgaa
gcggtggtcgcggtttccaacgccatccgccgtgcgcgtgccgggctttccgaccctaat
cgccccagcggttcgttcctgttcttggggccgaccggtgtgggtaaaaccgaactcacc
aaggcgttggcgaccttcctgttcgacaccgacgacgcgatggtgcggattgatatgtcc
gaattcatggaaaagcattccgtcgcccgcctgatcggtgcgcctccgggttacgtcggc
tatgaagaaggtggctatttgaccgaagcggtgcgccgccgtccgtattccgtgatcctg
ttggacgaggtggaaaaagcccaccccgacgtattcaacgtgctgctgcaagtgctggat
gatgggcgtttgaccgacgggcaaggtcgcaccgtggatttccgcaacactgtgatcatc
atgacctccaacctcggctcgcacctgattcaggaaatggcgggcgaagccaactacgag
cgcatgaaagcagcggtgatggaagtcgtcggtacgcatttccgccctgaattcatcaac
cggattgacgaaacggtggtattccatccgctggatcaggcagagattcgccagattgcg
gatattcagcttaataaccttcgtaagcggttggcggcgcgggatttggggattcagatt
accgatgcggcgttggatttgctggcagaagcgggatttgacccggtgtacggggcgcgt
ccgttgaagcgggcgatccagcagcaggttgagaatccgctggcgcagcaaatccttggc
ggcaagtttatgccgggggatacgattgcggtgggggtggaagagggcaggctgacgttt
atggcgttggtggaggctgacgaaacagtataa
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