KEGG   Thiothrix subterranea: HMY34_05430
Entry
HMY34_05430       CDS       T07831                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
tsb  Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:tsb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tsb02044]
    HMY34_05430 (sctD)
Secretion system [BR:tsb02044]
 Type III secretion system
  Type III secretion core apparatus
   HMY34_05430 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C Yop-YscD_ppl_2nd FHA Yop-YscD_ppl_3rd Yop-YscD_ppl_1st T2SSC DUF6264 T2SSB
Other DBs
NCBI-ProteinID: QQZ28240
LinkDB
Position
complement(1133639..1135012)
AA seq 457 aa
MASQHTSFILKVLNGINSGASVRLRTGSVVIGRSMTSDIILHDDNIADQHIQLLITPGSI
TLQPLARPVFVEAQEIAAESIELAPYQTVKLGNVEFLVADSRVSAPRTQAQKSPETNAKR
ATVAGTKSNNVPPPAKKSSAAKSSANKGMSGKTWLLLGVGLLLLANLIYWAPQFNRFLET
LGLRDSGEQQAAGLLKTLGEQDFNLVNEADGSVSLRGYTDTVEERNAIMGKIQDAGIKAN
VYVWAQDEMANSANMIARAMGQPGISFKPGATEGILVAQGFVTKKADWERVKTTILNDIG
GIRSIGEADFQSLDGYLASFVQFIEKKGLSSRITATTDGKSVIVNGELTQSEIQKLTGLR
QEFIGIQGDGPAIVLNVTDIRDRITLAIRSVSVGKIPFLVAKDGKKYMEGSALGEKYFVK
SIKSDHVVLTNNGMEIPFYYGIDKGRNDANSRTESQK
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggcaagtcaacacacttcgtttattctcaaagttctcaatggcattaacagtggtgcg
tcggttcgcttgagaaccgggagtgtggtcattggacgttcgatgaccagcgacattatt
ttgcatgacgacaatattgcagatcagcacattcaattattgatcacaccgggttcgatt
acgctacaacccttggctcgcccggtattcgttgaggcgcaagagattgctgccgaaagc
attgagttggcaccgtatcagacggtgaaattaggcaatgtcgagtttttggtagccgac
agtcgagtgtccgccccgcgcactcaagcacaaaaatcacctgagactaatgctaagcgt
gccactgttgcgggtactaagagtaataatgttccgcccccggcgaaaaaatcgtcagcc
gctaaatcatccgctaacaaaggcatgagcggtaagacttggttacttttaggggtgggc
ttattgttgttggctaatctcatttattgggcaccgcagttcaaccgttttctggaaacg
ctgggcttacgtgattccggcgaacaacaggccgcaggcttgctgaaaacactgggggaa
caggatttcaacttggtgaatgaggccgatggttcggtcagtttgcgtggctacaccgat
acggttgaagaacgcaatgccattatgggcaagattcaggacgcgggcatcaaagccaat
gtgtacgtctgggcgcaagatgagatggcgaatagtgccaatatgattgcccgtgccatg
gggcagccgggcattagcttcaagccgggcgcgaccgaggggattttggttgctcaaggt
tttgtcactaaaaaggccgattgggagcgcgtcaaaaccactatcctcaatgatattggg
ggtatccgctccattggtgaggctgattttcaatcgctggacggttatctagcgtctttt
gtgcagttcatcgagaaaaaaggactgtctagccgcatcaccgctacaaccgacggcaag
agcgttatagttaatggcgagttaacgcagtcggaaattcaaaaattaacaggtttgcgg
caggagttcattggaatacagggcgatggcccggcaattgtgctcaatgtcacggatata
cgcgaccgcattacattggcgatacgcagtgtcagcgtcggcaaaataccgtttctggtt
gcgaaagatggtaagaaatacatggaaggttcggcacttggcgaaaaatatttcgtaaag
tccattaagtctgatcatgtggtattgactaacaatggaatggaaattcctttttattac
ggtatagacaaggggagaaacgatgctaacagtcgaacagaatctcaaaaatga

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