Thiothrix subterranea: HMY34_05750
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Entry
HMY34_05750 CDS
T07831
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_05750
Transporters [BR:
tsb02000
]
Other transporters
Pores ion channels [TC:
1
]
HMY34_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
QQZ28301
LinkDB
All DBs
Position
1188348..1189052
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AA seq
234 aa
AA seq
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MKKFLVVNAGLAALMGSSMAEAGFSPYYAGAAIGASKNNGNEAQFCDECTGSQFTMHKKN
TGGAKVHKVYAGANLNPVFGVEAEYANLGDTYAIDMYRPEFGIPGGRAEYAKARQKTRGI
GISAKANHRITRKTSVYGKAGAFAWENKNSMDYTNLDGINERYKSTDRGVSPTVGLGVEH
EVTDRISIRVGWDRTFDTGKGDRFLELDANKNVVDLHSVKTDTDMIYVGATFNF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttcttgtcgtcaatgctggtcttgccgcgctcatgggttcaagcatggca
gaagcaggcttttccccctattacgcgggggcagccattggtgcatccaaaaacaacggc
aatgaagcccaattttgtgatgaatgcaccggctcacaattcaccatgcacaagaaaaat
accggcggcgccaaagtccacaaagtctacgcgggtgccaatttaaacccggtgtttggc
gtcgaagcggaatatgccaatcttggtgacacctacgctatcgacatgtaccgcccggaa
ttcggcattcccggcggacgcgctgaatacgccaaagcccgtcaaaaaacccgtggcatc
ggtatcagcgccaaagccaatcaccgtattacccgcaagacctcggtctacggcaaagcc
ggtgcatttgcttgggaaaataaaaacagcatggattacaccaacctcgatggcatcaat
gaacgctacaaaagcaccgaccggggcgttagcccaacggtagggcttggcgttgaacac
gaagtaaccgatcgcatcagcattcgggtggggtgggatcgcacttttgacaccggcaaa
ggcgaccgtttcttagagttggatgcgaataaaaacgttgttgatttacacagcgttaaa
accgacaccgacatgatctacgtcggcgcaacctttaacttttaa
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