Thiothrix subterranea: HMY34_05840
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Entry
HMY34_05840 CDS
T07831
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsb03032
]
HMY34_05840
03036 Chromosome and associated proteins [BR:
tsb03036
]
HMY34_05840
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_05840
DNA replication proteins [BR:
tsb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HMY34_05840
Chromosome and associated proteins [BR:
tsb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HMY34_05840
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HMY34_05840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QQZ28315
LinkDB
All DBs
Position
complement(1201394..1201666)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAVAEKSGLTKIDTDKAFKAFVEVISESMAKGDQVALVGFGTFLVRERQARSG
RNPRTGDTISIAAAKIPSFKAGKALKDAVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaattgattgatgcagtagcagagaagtccggtttgactaaaatcgat
accgataaagcgttcaaggcatttgttgaagtcatcagcgagtcgatggcaaaaggcgac
caagtggctttggttggctttggtacgttccttgtgcgtgagcgtcaggcacgttctggg
cgtaatccgcgcactggagacacaatttctatcgctgctgcaaaaattccttcatttaag
gctggtaaagcgctaaaagatgctgtacagtag
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integrated database retrieval system
