Thiothrix subterranea: HMY34_06295
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Entry
HMY34_06295 CDS
T07831
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMY34_06295 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_06295 (recC)
Enzymes [BR:
tsb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HMY34_06295 (recC)
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMY34_06295 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QQZ28397
LinkDB
All DBs
Position
complement(1281963..1285079)
Genome browser
AA seq
1038 aa
AA seq
DB search
MLYLHHSNQLEQLAQQFAQLQRENPLEPLAKEQVVVQNSGMGRWLSLQTAGYNGITANIR
YLFPAEMTWELLRMVLAEVPEKDPCAPTVMRWRLFDIFLSEADEWPELARYLSGGATAAW
QLAAQVAKVFDQYLFFRPDWIREWESGKGASDDWQARLWWRVAGEQQLPHWVRLQERFAH
ALASIDPAVLPKRICFFSVPVLSPGYVQLLGKVAEYLDIHIYLMNPCADYWGDIESEKRK
HKQQADVQDYFSVGNPLLASWGRQGRDFLDLLIEANADLDDVELFGEPDETTLLGRIQTD
MLLLRMPDVMEWDAADTSIAFHACHSPMREAEVLYDQLLALFTAHPDVTPADVVIMTPDI
DKYAPYLDAVFSSAPYPLPFSIADSSPGYAQSITNLCEHLLSLPQGRCDVESVLTLLEFE
EVRARIGVDEAQVQQCRAWIRAVNIRWGTEAGMRPELGGANTPEHTWRYGLDRLLLGYAM
PGEALFNGILPWNEIEGSQAEMLGRLQQVLEAVFELASWGRQSQTLAEWNRRFRYLLDAV
VGDDAPLQAVWQALDNLEKTVTQAGFGQPLEWAVFQSALAEQLDKRSESDGFLGRGITCC
ALMPMRTVPFRFVALIGMNDGIYPRRDARASFDRMGQGIKRGDRLKRDEDRYLFLESILS
ARDWLYLSYVGQSPQDNSELPPSVLVSELMDYLERCAPACREVLLTKHPLQAFSQKYLRG
EKGLFTYNSYIEPQAGNATPTVCPTFWQDFTLPEPDSAYRSLNLVDLIRFYQNPARVFLK
ERFGLRLSEYAEELPVREPFGLEKFRERDVRDCIFQQLQQALPVSTAEPLLRAQGLLPHG
KPGELVFRKEADVTEEFFNRIQPLAVWQRAPFSLTDGDFHLSGTLNKLDVTAGRTLYEFG
KLSYWNWLDAWLHHLALNTLPESIYPHVTLIHTPEESYQLEPVSDAREQLLQLLAWYWQG
LQAPLPFFPKSGLNLMEQKEPEVAKVMSTWEGSGNFAGECEKPEYRLLYRDSNPLETQEA
EFMAIAHGVFGQMLSVRK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgctttacctgcaccattccaatcagctcgaacaacttgcgcagcaatttgcgcagtta
caacgcgaaaatccgctcgaacccttggcgaaagaacaagtcgtggtgcaaaacagcggc
atggggcgctggctttcgctgcaaaccgctgggtataacggcattactgccaatatccgc
tatttgttcccggcggaaatgacgtgggaattattgcgcatggtattagcggaagttccc
gaaaaagacccgtgtgcgccaacggtaatgcgctggcggctcttcgatattttcctaagt
gaagcggatgaatggccggaactggcgcgttatttgagtggtggcgcaaccgccgcttgg
caattggcagcgcaggttgccaaagtttttgaccaatacctgttttttcgcccggattgg
attcgcgaatgggaaagcggtaaaggcgcaagtgatgattggcaagcgcggttgtggtgg
cgggttgccggtgaacaacaattgccgcattgggtgcgcctgcaagaacgttttgcgcac
gcacttgccagcattgatcctgcggtgctgcctaaacgtatctgctttttttccgtgccg
gtattgtcgcccggttatgtgcaattgctgggcaaggtggcggaatacctcgatattcac
atttacctgatgaacccgtgtgcggattattggggcgacatcgagtccgaaaagcgtaag
cacaaacagcaagccgatgtgcaagattatttcagtgtcggcaaccctttgctggcatcg
tgggggcggcaggggcgtgattttctggatttgctgattgaagccaatgccgatttggat
gacgtggaactgttcggcgaaccggatgaaactacgctgctggggcggattcagaccgat
atgttattgctgcgaatgccggacgtgatggaatgggacgcagccgatacgtccatcgcg
tttcacgcctgtcattcgccgatgcgcgaagccgaagtgttatacgatcaactgttggcg
ttgtttaccgcgcatcctgacgtgactccggcggacgtggtgattatgacccccgacatt
gataagtatgcgccgtatttggatgcggtattttcgagtgcgccttaccctttgccgttt
agcattgcggatagtagccccggttatgcgcaaagtatcaccaatctgtgcgagcatttg
ttgagtcttccgcaagggcgctgcgatgtcgaaagcgtgctgaccttgctggaattcgag
gaggtgcgggcgcgtattggcgtggatgaggcgcaagtgcagcaatgccgcgcgtggatt
cgggccgtcaatattcgctggggtacggaggctggaatgcgccccgaactcggcggcgct
aatacgccggaacatacgtggcgttatggtttggatcgcttgctgttgggttacgccatg
ccgggtgaggcattgttcaatggtattttgccttggaatgagatcgaaggcagccaagcc
gaaatgctagggcgcttgcagcaggtgttggaagcggtattcgagctggcaagctggggg
cgacagtcgcaaactttggcggagtggaaccgacgatttcgctatttgttggatgcggtg
gtgggcgacgatgcgcccctgcaagcggtgtggcaagccttggataatttggaaaaaacc
gtaacacaagccggtttcgggcagccgctggagtgggcggtgttccaaagtgccttggcg
gaacaacttgataaacgcagcgaatccgacggctttttggggcgcggtatcacttgctgt
gccttgatgccgatgcgcaccgtgccgtttcggtttgtggcgctgattggcatgaatgac
ggcatttacccgcgtcgcgatgctcgcgccagttttgaccgcatggggcagggcattaaa
cggggcgaccgtctcaagcgcgacgaagaccgttacctgtttctggaaagtatcctctcg
gctcgcgattggttgtacctcagctatgttgggcaaagcccgcaagataatagcgaattg
cctccctcggtgctggtgagcgaactcatggattatctggaacgctgcgctcccgcttgc
cgcgaagtgctgctgaccaaacacccgttgcaagcgtttagccaaaagtacttgcggggt
gagaaaggtttgtttacgtataattcgtacattgagccgcaagcaggtaatgcgaccccg
accgtttgcccgactttttggcaagatttcacgcttcccgaacctgattccgcctatcgt
tcgctcaatctggtagatttgatccgcttttaccaaaacccagcgcgggtgtttctcaaa
gagcgcttcggcttacgcctgagcgaatacgcggaagaactgccggtgcgtgagccgttc
ggcttggaaaaattccgtgagcgtgacgtgcgcgactgtatttttcagcaattgcagcaa
gccttgccggtgagtactgccgagccgttgttgcgggcgcaaggcttattgccacacggc
aaacccggtgagttggtgtttagaaaagaggcggatgttaccgaggaatttttcaaccgc
atccagcccttagcggtgtggcagcgtgcgccgtttagcctaacagatggcgatttccac
ctgagtggtacgctcaataaattggatgtgacggcgggacgcacactctacgaattcggc
aaactgagttactggaactggttggatgcgtggttgcaccatttagcgttgaataccttg
ccggaaagtatttacccccatgtcacgctgattcacacgccggaagagagttaccaactc
gaaccggtcagcgatgcgcgtgaacagttgctgcaattgttggcgtggtattggcaaggt
ttacaagcaccgttaccgtttttccccaaatccggtctcaatttgatggagcaaaaagag
ccggaggtggcaaaagtcatgagtacgtgggagggcagcggcaattttgcaggcgaatgc
gaaaaacccgaataccgcttgctgtaccgtgacagtaacccgctggaaacgcaggaagca
gaatttatggcgattgcccacggcgtatttgggcaaatgcttagcgtaaggaaatga
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