Thiothrix subterranea: HMY34_07225
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Entry
HMY34_07225 CDS
T07831
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00061
Fatty acid biosynthesis
tsb00071
Fatty acid degradation
tsb01100
Metabolic pathways
tsb01212
Fatty acid metabolism
tsb02024
Quorum sensing
tsb04146
Peroxisome
Module
tsb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMY34_07225
00071 Fatty acid degradation
HMY34_07225
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMY34_07225
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMY34_07225
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tsb01004
]
HMY34_07225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsb04147
]
HMY34_07225
Enzymes [BR:
tsb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMY34_07225
Lipid biosynthesis proteins [BR:
tsb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMY34_07225
Exosome [BR:
tsb04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMY34_07225
Exosomal proteins of breast cancer cells
HMY34_07225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQZ28563
LinkDB
All DBs
Position
1473213..1474877
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AA seq
554 aa
AA seq
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MEKLWLQSYPKHVPAAIDTHQYRSLVDLFQRSVAQYRDRPAYSNMGKILTYAEVDRLTQQ
FAAYLIHGAGLKPGDRIALMMPNLLQYPIALFGALRAGLVVVNTNPLYTDRELEHQLKDS
GAKAIVILANFAHTLESVMDEVGIKTVITTEIGDLLGFPKSLLVNAVVKYVKKMVPAFTL
PEAITFNQALTLGKQYAHNFTDTQPQHEDAAFLQYTGGTTGVAKGAVLTHRNMIANMLQA
EAWTTEDLISGTEVFITALPLYHVFALTANALFALKMGAKNVLITNPRDLPAFIKDLAHE
PFTFITGVNTLYNALLNQPDLQKVDFSRLKIALGGGMAVQKFVAERWKALTGVTLLEAYG
LTETSPAVCINPVDLTDYNGMIGLPIPSTDISIRDLDGNELDVGEAGELWVRGPQVMQGY
WQRPDETANIMSGDWLRTGDVAVINERGFIKLVDRLKDMVLVSGFNVYPNEVEDVLASHP
KVLEAGVIGVKNEHSGEVVKAFVVKKDQSLTLEELKAYCRKELSAYKCPKQIVFVESLPK
SNVGKILRKELRNW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttatggctacaaagctatcccaaacacgttccggcagcgattgacacccat
caataccgatcgctggtggatctgtttcagcgcagtgtggcgcaataccgcgaccgccct
gcctacagcaatatgggtaaaatcctaacgtatgcggaagttgaccgcctgacgcaacag
tttgccgcttacctgatccacggtgcggggctgaaacccggcgaccgcatcgcccttatg
atgcccaacctgctgcaatacccgattgcgctattcggggcattgcgagcgggcttggta
gtggtcaataccaatccgctctacaccgaccgcgagcttgaacaccagttgaaagattct
ggcgcaaaagccattgttatcctcgccaatttcgcgcatacgctggaaagcgtgatggac
gaagtgggcattaaaaccgttattaccaccgaaattggcgatttgctgggtttccccaaa
tcgctgctggtgaatgcggtggtgaaatacgtgaaaaaaatggtgcctgcattcaccttg
ccggaagccatcaccttcaaccaagcgctgacactcggcaaacaatacgcgcacaacttc
accgatacgcaaccgcaacacgaagatgccgcgtttctgcaatacacgggcggtacgact
ggcgttgccaaaggcgcggtactgacccaccgcaatatgattgccaatatgctgcaagcg
gaagcgtggacgacggaagatttgatttcaggcaccgaagtcttcattaccgccctaccg
ctgtaccatgtgtttgcgctgacggcgaatgccctgtttgccttgaaaatgggtgcgaag
aatgtgctgatcaccaatccgcgtgacttaccagctttcatcaaagacttggcacacgaa
ccgtttaccttcatcaccggcgtgaacacgctctacaatgcgctgctgaatcagcctgat
ttgcaaaaagtggatttttcgcgcctaaaaattgcattgggcggtggcatggcagtgcaa
aaattcgtcgccgaacgctggaaagccttaaccggcgtgaccttgctggaagcttatggc
ttgaccgaaacttcccctgccgtgtgcattaatcccgtcgatttaacggactacaatggc
atgatcggcctacccattccgtctaccgacatctccatccgcgaccttgacggcaatgaa
ttagacgtgggtgaagcaggcgaattgtgggtacgcggcccccaagtgatgcaaggttac
tggcaacgccccgatgaaaccgccaatattatgtccggcgactggttacgcaccggtgat
gtcgccgttatcaatgaacgcggctttattaagctggtggatcgcttaaaagacatggtg
ttggtttccggtttcaacgtttaccccaacgaagtcgaagacgtgctggcaagccacccc
aaagtattggaagccggtgtcattggtgtaaaaaatgaacattccggcgaggtggtcaaa
gccttcgtggtcaaaaaagaccagagcctgacgctggaagaactcaaagcctattgccgc
aaagaactttccgcgtacaaatgcccgaaacaaatcgtgtttgtggaatcattacccaaa
agcaatgtgggtaagattttgcggaaagagttgcggaattggtaa
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