Thiothrix subterranea: HMY34_07440
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Entry
HMY34_07440 CDS
T07831
Name
(GenBank) 30s ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsb03009
]
HMY34_07440
Ribosome biogenesis [BR:
tsb03009
]
Prokaryotic type
ribosomal protein modification factors
HMY34_07440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QQZ28599
LinkDB
All DBs
Position
complement(1518523..1520250)
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AA seq
575 aa
AA seq
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MPTQTFIPGKDAALEASIAVMQDKLQRLGFHIEEASWLNPIANVWSVHIRDRDCPMLFTN
GKGASQKAALASALGEYFERLSTNYFWADFYLGKTIADSNFVHHPAEKWFALDGSGNLPA
GLLDEDALSFYDPETSLDAVKLVDINSGNEERGICALPYVRQCDGATVWFPVNIIGNLYV
SNGMSAGNTATEARTQALSEIFERHIKFRIIAEGICLPDVPEAIIARYPHIQAGIAELRA
AGFGILVKDASLGGQYPVMCVTLLNPDDQGVYASFGAHPRFEVALERSLTELLQGRALDR
LAGFSEPSFELDDVASPQNLETHFIDSSGPLHWDFLWNEPDYEFVDWNFSGTTEEECQHL
MERIHADDFDIYIMDFEHLGVYACRIIVPEMSEIYQVEDLEWDNNSTGNAVREAILHLPD
LEDEECTELFDTIEELGLDDHQPVAALIGLAPDAGSLWADLRVGELKTLLALAMDDEDAI
REGCQWIRHFEQINDERRRVYRCIEALLDMDDVAGYMPNVGLLYGETALQQAQALLDGSV
RFWGITAPTLELHGCDTHQRLLTAYRKVYPTLAAL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccaacacaaacctttattccgggcaaagatgccgcactggaagcgtcgattgcggta
atgcaagacaagctacagcgccttggtttccacatcgaggaagcttcatggctgaacccg
attgccaatgtgtggtcagtccacatccgcgatcgtgattgcccgatgttgttcaccaat
ggcaaaggcgcatcgcagaaagccgcgcttgccagtgccttgggtgaatatttcgagcgc
ctcagcaccaactatttctgggcggatttctatctgggcaagaccattgccgatagcaat
tttgtgcatcaccctgcggaaaaatggttcgccttggatggttccggcaatttacccgcc
ggtttgttggatgaggacgccttaagtttttacgacccggaaaccagtttggatgcggtc
aaattagtcgatattaattccggcaacgaagagcgtggcatctgtgccttgccctacgtg
cgccagtgtgacggggcaaccgtgtggtttccggtcaatattatcggtaatttgtacgtc
agcaatggcatgtcggcaggcaataccgccacggaagcacgtactcaagctttatcggaa
attttcgagcgccacatcaagttccgcattattgcggaaggaatctgtctgccggatgta
ccggaagcgattattgcgcgttatccgcatattcaggccggtattgcggaattacgcgcc
gccggttttggcattttggtgaaagatgcgtcattgggtgggcaatacccggtgatgtgc
gtgaccttgctgaaccccgatgatcagggtgtgtatgccagttttggggcgcatccgcgt
tttgaagtggcgctggaacgttccctcacggaactcttgcagggcagggcgttggatcgc
ttggcgggtttttctgagccgagttttgagctggacgatgtggcttccccgcaaaatctg
gaaacgcatttcattgattccagcggcccgctgcactgggatttcttgtggaatgaaccc
gattacgaatttgtcgactggaatttcagtggcacgaccgaggaagagtgccagcatttg
atggaacgcatccatgcggatgatttcgacatctatattatggatttcgagcatttgggc
gtgtatgcctgccgcattattgtgccggaaatgtctgaaatttatcaggtcgaagatctg
gagtgggacaataacagcacgggcaatgcggtacgcgaggcgattctgcatttgccggat
ttggaagatgaggaatgcaccgagctgttcgataccattgaagagttgggtttggatgat
caccagccggtggcagcgctgattgggttagcgccggatgcgggttcgctgtgggcggat
ttacgggtcggcgagttgaaaaccttgctggcattggcgatggatgacgaagacgcgatt
cgggaaggttgccagtggattcgccatttcgagcaaatcaatgacgagcgccgccgcgtg
taccgttgcatcgaagccttgttggacatggatgatgtggcgggttatatgccaaatgtg
ggtttattgtacggtgaaaccgcgttgcaacaggcgcaagccttgctggatggcagcgtg
cgcttctggggtattaccgcgccaacgttggaattgcacggttgcgacacgcaccagcgt
ttgctgacggcataccggaaggtttatccgacattagcagcgctgtaa
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