Thiothrix subterranea: HMY34_07500
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Entry
HMY34_07500 CDS
T07831
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsb03009
]
HMY34_07500
Enzymes [BR:
tsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HMY34_07500
Ribosome biogenesis [BR:
tsb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMY34_07500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QQZ28609
LinkDB
All DBs
Position
complement(1527996..1528976)
Genome browser
AA seq
326 aa
AA seq
DB search
MKERIQKLLSRAGYGSRREIERMVNAGEILVNGQRAESGQAIDENDQVTLRGQRLHLSSR
VNATHKVLMYHKPAGEVCTLSDPDGRPTVFDSLPKIRAGRWIMVGRLDINTDGLLLFTTD
GELANKLMHPSSEIEREYACRVLGEVNNEMLIRLQEGVELEDGKASFMRIKDAGGEGVNH
WYHVVLAEGRNREVRRLWESQGVKISRLIRVRYGNIMLPRYLRSGHHKELEVRELRKLYG
LVNMAFEDGSDFTAERPERRSGARLGMKSVDSGRTAIGGSHPSARRSSLARPSSSERSSS
PARPTVSRRPSSGSGAGKRPQPRGRG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgcatccaaaaactcctctcccgcgctggttacggctcacgtcgtgaaatc
gagcgcatggtcaacgctggcgaaattctggtgaacggtcaacgtgccgaatccggtcag
gccattgatgaaaatgatcaagtgaccttgcgtgggcaacgcttgcacttgagttcccgc
gtcaatgccacccacaaagtgctgatgtaccacaagcctgcgggcgaagtgtgtaccttg
agtgacccggatggtcgcccgacggtttttgacagcttgccgaaaatccgcgctgggcgt
tggatcatggtgggtcggcttgacatcaatactgatggcttattgttgttcactaccgat
ggcgaattagcaaacaagctaatgcacccgtcgtctgaaatcgagcgcgaatacgcttgc
cgcgtgttgggcgaagtcaacaatgaaatgctgatccgtttgcaggaaggcgtggaattg
gaagacggcaaagccagcttcatgcgcatcaaagacgcaggcggcgaaggggtcaaccat
tggtatcacgtcgtgcttgccgaaggtcgcaaccgcgaagtgcgccgcttgtgggaatcg
cagggcgtgaaaatcagccgtttgattcgggtgcgttacggcaacattatgctgccgcgt
tacttgcgcagtgggcatcacaaagagctggaagtgcgcgaattacgcaaactctacggc
ttggtgaacatggcgtttgaagacggctcggatttcaccgccgaacgcccggaacgccgt
tctggggcaagactggggatgaaatcggtggacagtgggcgcacggcgattggcggaagc
catccgtcggcacggcggtcgagtttggcgcgtccgagcagttcggagcgttctagcagt
cccgcccgtcccactgttagccgtcgccctagcagcggcagcggtgcaggcaagcgcccg
caaccgcgtgggcgtggctaa
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integrated database retrieval system
