Thiothrix subterranea: HMY34_07945
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Entry
HMY34_07945 CDS
T07831
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
tsb
Thiothrix subterranea
Pathway
tsb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMY34_07945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_07945
Transporters [BR:
tsb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HMY34_07945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DUF4271
DcuC
P5CR_dimer
Motif
Other DBs
NCBI-ProteinID:
QQZ28692
LinkDB
All DBs
Position
1615879..1617162
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AA seq
427 aa
AA seq
DB search
MSALIIFGLLILLMLTGMPISIALGLTVLTFLFTMTSVPIEAVALKLFTGIEKFEIMAIP
FFILAGNFLTHGGVAKRMIVFASSMVGHWHGGLGLAGVLACALFAAVSGSSPATVVAIGA
ILLPAMVKAGFPKQFGAGVITTSGALGILIPPSIVMVMYSVATNTSVGALFMAGVVPGFL
LAMFLGLTTWYRARKNNYPRQPKASFAMRAKAFRESMWGLLLIVVVMGGIYTGIFTPTEA
AAMSAVYAFIVAVFVYKDMGLKDVPKVLLNSASMSAMLLYIITNAVMFSFIMTNEQIPQS
LAEWMLAQGMGPIIFLLAVNVLLLMAGNFMEPSSIVLIFAPILFPMAMKLGIDPVHFGIL
MVVNMEVGMCHPPVGLNLYVASGITKMGITELTIAVWPWLLTMLGFLVLVTYVPAISLWL
PRLMGML
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattaatcatttttggcttgttaattctgctaatgttgaccgggatgccgatt
tccatcgcgcttggtctgactgtgttgaccttcttgtttaccatgacatccgtgccgatt
gaggcggtggcgttgaagctattcaccggcattgagaagttcgagatcatggcgattcca
ttctttatcctcgcgggcaatttcctcacgcacgggggggtggcgaaacgcatgattgtg
tttgcctcgtcgatggtcgggcattggcacggcggcttagggctggcgggtgtattggct
tgtgcgttgttcgcggcagtatccggttctagccctgcaacggtggtggcgattggggcc
attttgttgcctgcgatggtgaaagcgggtttcccgaagcaatttggtgcgggtgttatt
accacgtcgggtgcgttggggattttgattccgccgtccatcgtgatggtaatgtattcg
gtagcaaccaatacctcggtgggtgcgctgttcatggcgggggttgtccccggctttttg
ctggccatgtttttgggcttaaccacttggtatcgggcgcggaaaaacaattacccgcgt
caacccaaagccagttttgcgatgcgtgcgaaagcgttccgcgagtccatgtggggcttg
ctgctgatcgtggtggtgatgggcgggatttacaccggcattttcaccccgacggaagca
gctgcgatgagtgcggtgtatgcgtttatcgtggcggtgttcgtgtacaaggacatgggc
ttgaaggatgtgccgaaagtgctgctgaattctgccagcatgtcggcgatgttgctgtac
atcatcaccaacgcggtcatgttctcgttcattatgaccaatgagcagattccgcaatcg
ttggcggagtggatgttggcgcaaggcatggggccgatcatcttcttgttggcagtgaat
gtgctgctgttgatggcgggtaacttcatggaaccgtccagcatcgtgctgattttcgcg
ccgattttattcccaatggcgatgaagctggggattgatccggtgcatttcggcatcctg
atggtggttaatatggaagtgggcatgtgccatccgccggtgggtttgaacctgtacgtg
gcttcgggaattaccaaaatggggattaccgagctgaccatcgcggtctggccttggttg
ctgaccatgttggggttcttggtgttggtcacgtatgtgcccgctattagcttgtggttg
ccgcgcttgatgggcatgttgtaa
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