KEGG   Thiothrix subterranea: HMY34_08010
Entry
HMY34_08010       CDS       T07831                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
tsb  Thiothrix subterranea
Pathway
tsb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tsb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HMY34_08010
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tsb02022]
    HMY34_08010
Two-component system [BR:tsb02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HMY34_08010
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 HTH_50 FleQ AAA_3 AAA AAA_7 AAA_22 AAA_16 AAA_2 Herpes_BLRF2 bpMoxR
Other DBs
NCBI-ProteinID: QQZ28705
LinkDB
Position
complement(1628936..1630291)
AA seq 451 aa
MIAPNVLLVDDEKTVRDATAQSLLLAGYEVQTFSRAADALPLITAEFEGVIISDIRMPEM
DGLEFLQHVLRIDRDLPVILISGHADVATAVSAIRNGGYDLLEKPFSNTQLVEVLKRASD
KRRLTLENRALKEALANQTRPGPRIIGQTPAIMLLRKMITRIANVNADVLVMGETGTGKE
LVARSIHEQSQRRDHNYVAINCAAIPASLLDSELFGHEAGAFTGAKGKRIGKFEHANGGT
LFLDEIEGMPLTTQAPLLRVLQERQIERLGSNKLIPLDIRVIAATKVDLKDAAERAEFRR
DLYYRLNVVTLEIPPLRARREDIPLLFQHFVLIAAARCETEVPPLNSRALHVLMGHDWPG
NIRELRNIAERYVLLGEAYNFDLATLMNAGDRLEGLSLTEQVACFEKTLIVQALNHHQGN
TRAVMEALDVPRKTLTDKMKKYGLEREQFRE
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgattgccccgaatgttctgttggttgatgatgaaaaaacagtccgcgatgccacggcg
caatcgctgctgctggcggggtacgaagtgcaaacgtttagccgtgccgctgacgctttg
ccattgatcacggcggaattcgagggcgtgattatttccgacatccgaatgccggaaatg
gatggcttggaatttctgcaacacgtcttgcgcattgaccgcgacttgccagtgattttg
attagcggacacgcggatgtggcaacggcagtcagcgcgattcgcaacggcggttacgat
ttgctggaaaaaccgttttccaatacgcaattggtggaagtgttgaaacgcgccagtgac
aagcgccgcctcaccttagaaaatcgcgccttgaaagaagcactcgctaatcaaacccgc
cccggcccgcgcattattgggcaaaccccggcgattatgttgttgcgcaaaatgattacc
cgcattgcgaatgtgaatgccgatgtgttggtcatgggcgaaaccggcacgggcaaagag
ttggtggcgcgttcgatccacgaacaaagccagcgccgcgatcacaattacgtggcgatt
aactgcgcggcgattcccgccagtttgttggacagtgagttattcgggcatgaagcgggc
gcattcaccggcgcaaaaggcaaacgcattggcaagtttgaacacgccaacggcggcacg
ctgtttctggatgaaatcgaaggaatgccgctgaccacacaagcgccgttattgcgggtg
ctgcaagaacgccagattgaacggctggggtcgaacaagctgattccgctggatattcgg
gtgatcgccgccactaaagtcgatttgaaggatgctgccgaacgtgcggaatttcgccgc
gatttgtattaccgcttgaatgtggtgacgctggaaattcccccgctgcgagcgcgacgt
gaagacattccgttgctgtttcagcatttcgtgttgattgcggcggcgcgttgtgaaacc
gaagtaccgccgctgaatagccgtgcgctgcacgtgttgatggggcatgactggccgggg
aatatccgcgaattgcgcaatattgccgagcgttatgtgctattgggggaggcttacaac
tttgatctggcaaccttgatgaacgcgggtgatcggctggaagggctgtccttgaccgaa
caagtggcgtgtttcgagaaaactttgattgtgcaggcattaaaccaccatcagggcaat
acccgtgcggtgatggaggcgttggatgtgccgcgcaaaaccctgaccgacaaaatgaaa
aagtacggcttagagcgcgaacagtttcgggaatag

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