Thiothrix subterranea: HMY34_08990
Help
Entry
HMY34_08990 CDS
T07831
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMY34_08990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_08990
Enzymes [BR:
tsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMY34_08990
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMY34_08990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_22
PIF1
AAA_16
AAA_30
Neocarzinostat
nSTAND_NTPase5
ATPase_2
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QQZ28878
LinkDB
All DBs
Position
1841913..1843952
Genome browser
AA seq
679 aa
AA seq
DB search
MSQTAYTLQIAVPRPLRTLLSYSHHADAALPVGTRVLVPFGKQQSVGLVISAECTPETDN
PDAPFTIKPVDAVLDAMPLPDAHLLELLQWAARYYHHPVGEVIFSALPVALRKPKPLSTR
LQKLLVSSTPTAATSPNTARLQLTDEQQQCLHHIQQWNAQTPRRPILLHGITGSGKTEIY
LRLIAPLFAAGKQVLVIVPEIGLTPQLLLRFAHFFGDTPMACLHSGLSDGDRLKAWLQAR
SGAAQIIIGTRSAIFTPAPHLALIVIDEEHDASLKQQEGFRYHARDLAIKRAQMLDIPIL
MGTATPSLEALYNAQTSRFHYARLERRPGTTRKPDLQIQDTRPFELQAGLTPQSLQAIRG
TLARGEQIMVFLNRRGFAPTLFCPSCGWHANCDHCSVKMTWHARRNRLVCHHCGAEQTTP
MQCPVCKNPQLTTQGQGTERLELTLQTTFPDALVVRIDRDSTSRKGQLEDKLSTVRSNDP
LILVGTQMLAKGHDFPNLTLVVIIDIDQSLLSTDYRALERLGQLLVQVAGRAGRADKPGR
VILQTSQPDHPLLHQLVGHGYTPFARQLLEDRKRWHFPPFGYQALIRASSTVSMEKALEF
LEHVSQRLLAADGAGIQRLGPIPAPLEKRANRYRAQLLLGSQQRAALHNALHQLLQHAAS
LPGRSCVRWSIDIDPIEFS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaccgcctacaccctccaaattgcagtgccacgcccactccgcaccttgctc
agttactcccatcatgccgatgccgcgctaccggtcgggacgcgcgttctcgtgccgttt
ggcaagcaacagtccgtcggcttggtgatcagtgccgaatgtacgccggagactgacaac
cccgatgcaccgtttaccatcaagcccgtggatgccgtgcttgatgcgatgccactgccc
gatgcgcacttgctggaattgttgcaatgggcagcgcgttattaccaccacccggtgggc
gaagtgattttttccgccttgcccgtcgcgttgcgcaaaccaaaaccactttccacgcgc
ctgcaaaaattgctggtgtcgtcgaccccgaccgctgcaacatcacccaacaccgcccgc
ttgcaattgacggacgaacaacaacaatgcctgcaccacatccagcaatggaatgcacaa
accccgcgtcgcccaattctattgcacggcattaccggcagcggcaaaaccgaaatttac
ctgcgcctgattgcgccactgtttgcagcgggaaaacaagtgctggtcatcgtgcccgaa
atcggcttgaccccacaattgctgttacgttttgcccatttttttggcgataccccgatg
gcgtgtttgcattccggtttgagtgatggcgaccgcctcaaagcgtggttgcaagcccgc
agcggcgcggcgcaaatcattattggcacgcgctcggcgattttcacccctgcaccccac
ctcgcgctgattgtgattgacgaagaacacgatgcttccctcaagcaacaggaaggtttt
cgctatcacgcccgtgatctggcgattaaacgcgcccaaatgttggatattcccatcctc
atgggaaccgccacgccgtcgttggaagcgctgtacaatgcccaaacctcgcgctttcat
tacgcccgcctcgaacgtcgccccggcaccacgcgcaaacccgatttacaaattcaggat
acccgcccgtttgaattgcaagccggtttaaccccgcaaagcctgcaagccattcgcggc
accttagcgcggggcgaacaaatcatggtattcctgaatcggcgcgggtttgcgcccacc
ctgttttgcccttcctgcggctggcacgccaattgcgaccattgcagcgtgaaaatgact
tggcacgcacggcgtaaccgcttggtttgccaccattgcggcgctgaacaaaccacgcca
atgcaatgcccagtgtgcaaaaatccccaactcaccacccaaggccaaggcacggaacgg
ctggaactcaccctgcaaaccacgtttcccgacgccctcgtggtgcgcattgaccgcgat
agcaccagccgcaaagggcagctcgaagacaagctcagcacggtgcgcagcaatgacccg
ctgattctggtcggcacgcaaatgctggcgaaaggtcacgatttccccaatctcaccttg
gtggtgattattgacattgaccaatcgctgctcagcaccgattaccgcgctttggaacgc
ttggggcaattgctggtgcaagtcgcggggcgtgcggggcgtgccgacaaaccggggcgg
gtgattttgcaaaccagtcagccggatcaccccttattgcaccaactggtcgggcatggt
tacaccccgtttgcgcggcaattgctggaagatcgcaaacgctggcatttcccgcccttc
ggctaccaagccttgattcgtgccagcagcaccgtgagcatggaaaaagccttggaattt
ttggagcacgttagtcaacgtttgttagcagcggatggcgcggggattcagcgtttgggg
ccgattcccgcaccattggaaaaacgcgccaaccgttaccgggcgcaattgctgttgggg
agtcagcaacgcgccgcattgcacaacgctttgcaccaattgctgcaacacgccgccagt
ttgccgggacgttcgtgcgtgcgctggtcgattgatattgatccgattgagtttagctag
DBGET
integrated database retrieval system
