KEGG   Thiothrix subterranea: HMY34_09615
Entry
HMY34_09615       CDS       T07831                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tsb  Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:tsb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tsb02048]
    HMY34_09615
Enzymes [BR:tsb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMY34_09615
Prokaryotic defense system [BR:tsb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMY34_09615
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 HSDR_N DEAD Helicase_C HSDR_N_2 DUF4145 T1R_D3-like CbiA
Other DBs
NCBI-ProteinID: QQZ30932
LinkDB
Position
complement(1957560..1960913)
AA seq 1117 aa
MQSTNFAFLRPHHDTLANLGGLAEAVLFLDPGSALTRLRGFAEEVTRTIYHLERLPRLPQ
ASFYDLLKDSVFTGCVSRALLDQLHFLRVQGNDTAHGGNGDARSAHVALGKAYEIAAYMA
VRYYDYSPAKIAPFSSVADPRISAKQLKKLEDELQQTREALERERTQHSERLSPPSPPEA
TQRQAASQQVANSLHWNEAQTRALLIDVMLQKAGWDVGKPAQVSVEFVVDYPDNVSGKGR
ADYVLWGDNGQPLAVIEAKKSGNKSLQAGREQARLYADALEHMGYQRPVIFYTNGYETFI
WDDHQYNTYRPVYGFYSKDSLDYLIYQRHYRVAALEQHNPELKIADRPYQIEAIKTVAAH
FQQQRRKALIIQATGTGKTRVAIALAELLLRTGWAKRVLFLCDRKELRTQADEAFKHNLP
SEPRCVIGETNRIDQSARIYIATYPGMMSRFAQLDVGFFDLIIADESHRSIYNRYRDLFD
YFDALQLGLTATPVKFISRNTFDIFDCETTDPTYEFGLDAAINNDPPYLAPFRAKDLTTE
FLRNGIHYKDLSKEQQQQLEADLGEEQARITTIAGKDIGRKIFSVDTDRAILENLMNHGI
KDETGSLVGRTIIFAQRQDHAEHLEALFCKLYPQYGSKVCKVIHNQIPKVESLIKEFKKK
GNHDFRIAISVDMLDTGIDVPEVVNLVFAKKVMSWVKFWQMIGRGTRLCPNLFGTGKHKT
EFRIFDHYDNFTFFEQEYKEPDDVGSKALLQTLFEARLELVDAALKANHAAALDTALALL
RADLNDLPEDSIAVQRELRNVRVLQETDALQRMTAATRHLLASKIAPLMAARVLRDKHAT
QFDKLMATLQRCWVEQASCLADKRDALLAELDKLAVNIQAVRQKDAVIAEVRRAEFWQAL
SMERLEWVRTELRGIMKYRQTGDSVSYGTPTTKTKDGGLEKAEREVKIAGVNEALLYRRR
LKVLLDGMITENPIFQKIRNGQAIAALELQTLTSTILTSHPGVSLEVLNQFYGRTAEQLQ
ETVRELVGLDVQAVEQHFTTFLHQHPTLTAQQVRFMNLLKNYIAEHGSIPVDTLYDAPFT
SVDYRGIDGVFSEADAGELFAVLKPFLRKKSLLPRTL
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgcaatccaccaactttgcgttcctgcgcccgcatcacgacacgcttgctaaccttggc
ggtttggcagaagcggtgttgttccttgatcccggcagtgctttgacgcgcttgcggggt
tttgccgaagaagttacccgcacgatttatcacctcgaacgtttgccgcgtttaccccaa
gccagtttttacgacttgttgaaagacagcgtattcacaggttgtgtcagccgcgctttg
ctcgaccaactgcattttttgcgggtgcagggcaatgataccgcgcacggtggcaacggc
gatgcccgcagtgcgcacgttgcgctgggcaaagcctatgaaattgccgcgtacatggca
gtgcgttactacgactattcacccgccaagattgcgccgtttagcagcgttgccgacccg
cgcatcagtgccaagcaactcaaaaagctcgaagacgagttgcagcaaacccgcgaagca
ttggaacgcgaacgcacccaacacagcgaacgcctttccccaccctcgccgcccgaagcc
acccaacgccaagccgccagccaacaagtcgccaattccctgcactggaacgaagcgcaa
acccgcgctttgctgattgatgtcatgctgcaaaaagccggttgggatgtgggcaagcct
gcacaagtcagtgtggaattcgtggtggattaccccgataacgtctccggcaaaggtcgc
gccgactacgtgctatggggtgacaatgggcaaccgctggcggtgatcgaagccaaaaag
tccggcaataaaagtctgcaagcggggcgagaacaagcgcgtctgtatgccgatgcgctc
gaacacatgggctaccagcgtccggtaattttttacaccaacggctacgaaacctttatc
tgggacgatcaccagtacaatacctaccgccccgtatacggtttttacagcaaagacagc
ctcgattacctgatctaccagcgccattaccgcgtcgccgcactggaacaacacaaccct
gaactgaaaattgccgaccgcccttaccagattgaggcgattaaaaccgtggcggcacat
ttccagcaacaacgccgcaaagccttgattatccaagccacaggcacgggtaaaacccgc
gtggcgattgcgctggcggaattgctgttacgcaccggctgggcaaaacgggtgctgttt
ttgtgtgatcgcaaggaattgcgcacccaagccgatgaagcctttaagcacaatttgccg
agtgagccgcgttgcgtgattggcgaaaccaaccgcatcgaccaatccgcacggatttac
attgccacttaccccggcatgatgagccgctttgcccagcttgatgtgggctttttcgac
ctgatcattgccgatgaatcgcaccgcagtatttacaaccgctaccgtgatttgttcgat
tatttcgacgcgctgcaattgggcttgaccgcgacacccgtgaaattcatcagccgcaac
acctttgacattttcgattgcgaaaccactgacccgacctatgaattcggactggatgcg
gcaatcaataacgatccgccgtaccttgccccgttccgtgccaaggatttaaccaccgaa
ttcctgcgtaacggcattcactacaaggatttgagcaaggaacaacagcagcaactcgaa
gctgatttgggcgaggaacaagcgcgtatcaccacgattgcaggcaaagatattgggcgc
aaaatattcagcgtagacaccgaccgcgccattctcgaaaacctaatgaatcacggcatc
aaagatgaaaccggctcgctggtaggcagaaccattatttttgcgcaacgccaagaccac
gcggaacacctcgaagccttattctgcaagctctacccgcaatacggcagcaaagtttgc
aaggtgattcacaaccagattcccaaggtcgaaagcctgatcaaggaattcaaaaagaag
ggcaaccacgatttccgcatcgccatctcggtggacatgctcgacaccggcattgatgtg
ccggaagtggtcaatctggtgtttgccaaaaaagtgatgtcgtgggtgaagttctggcaa
atgattgggcgcggcacacgcctttgccccaacttgtttggtactggcaagcacaaaacc
gaattccgcatttttgaccattacgacaatttcacgttttttgagcaggaatataaagag
ccggatgacgtgggcagcaaagccttgttgcaaaccttgtttgaggcacggctggaattg
gtggatgcggcacttaaagccaatcatgcggcggcattggatacggcacttgccttgctg
cgggcggatttgaacgacttgccggaagacagcattgcggtgcagcgcgagttgcgcaat
gtgcgggtgctgcaagaaaccgatgccttgcagcgcatgactgccgcaacccgccatttg
cttgccagcaaaatcgcgccattgatggcggcacgggtattgcgcgacaaacacgctacc
cagttcgacaaactcatggcgacgttgcaacgctgttgggtggaacaagcgagttgtttg
gcggataagcgcgatgctttgctggcggaactggataaactcgccgtcaatattcaggca
gtgcgccagaaagacgcggtaattgccgaagtgcgccgcgccgaattctggcaagccttg
agcatggaacggctggaatgggtgcgcactgaattgcgcggcattatgaaataccgccaa
acgggtgatagcgtgagctacggcacgccgaccacgaaaaccaaggatggcggattagaa
aaagcggagcgtgaggtgaagattgcgggagtaaacgaggcattgctgtaccgtcgccgc
ctaaaagtgctgctggatggaatgattacagagaatccgatttttcagaaaatccgcaat
ggtcaggcgattgctgcgcttgaattgcaaaccctgacctcgaccattctgaccagtcac
cccggtgtgagtttagaggtgttgaatcagttttatgggcgtaccgccgaacagttgcag
gaaacggtgcgcgaattggtggggctggatgtgcaggcggtggaacagcatttcaccacc
tttttgcatcagcacccgacgctaacggcgcaacaggtgcgctttatgaatttgctgaaa
aactacattgcggaacacggcagcattccggtggatacgctgtatgacgcgccgtttacc
agcgtggattatcgcgggattgatggggtgtttagcgaggcggatgcgggggaattgttt
gcggtgttgaagccgtttttgcggaagaagtctttactcccccgcacgctgtaa

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