Thiothrix subterranea: HMY34_09650
Help
Entry
HMY34_09650 CDS
T07831
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsb03016
]
HMY34_09650 (truD)
Enzymes [BR:
tsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HMY34_09650 (truD)
Transfer RNA biogenesis [BR:
tsb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMY34_09650 (truD)
Prokaryotic type
HMY34_09650 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QQZ28997
LinkDB
All DBs
Position
1966580..1967644
Genome browser
AA seq
354 aa
AA seq
DB search
MNPTTFDTTGFARAYAAPLRGEFRSLPEDFIVDEQMEIALTGSGEHLWVQVRKTGANTDW
VAGQLARCAGVPAKEVGYAGLKDRHAVTTQWFSLQLPGMADPDFAALPAEIEVLQQQRHD
KKLRRGALEANRFILTLRHCSGDFAEAAAICEQISQHGIPNYYGDQRFGHNFGNLRKAER
WFAAGVEPKQRNQRSLYLSAARSWIFNNVLAQRVADGTWNQRVPGDVFMFEGGSAWFADD
ASAELPARLATQAIHPTGVLWGRGELPTAGEARELEAEQAARFPIFCAGLEKQGLKQERR
ALRVNVGTVGFEVVDDSTLRLSFALPAGAYATVVLEQLGTFVVPLQIQAHAVLP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaactacctttgataccacgggctttgcccgcgcttatgctgccccgttacgc
ggcgaattccgcagtctgccggaagattttatcgtcgatgaacaaatggagattgccctc
accggcagtggtgaacatttgtgggtgcaagtccgcaaaaccggcgcgaataccgactgg
gtagcggggcaactcgcccgctgtgccggtgtgcctgccaaggaagtcggttacgcgggg
ctaaaagaccgccatgccgtcaccacgcaatggtttagcctgcaattgccgggcatggct
gacccggattttgcggcattgcctgctgaaatcgaagtcctccagcaacagcggcatgac
aaaaagctacgacgcggcgcgttggaagccaaccgtttcatccttaccttgcggcattgc
agcggcgatttcgccgaagccgctgcgatttgcgaacaaatcagccagcacggcattccc
aattactacggcgaccagcgtttcgggcataactttgggaatttgcgcaaagccgaacgt
tggtttgcagcgggtgtagagccgaagcaacgtaaccagcgcagcttgtatttgtcggca
gcgcgttcgtggattttcaataatgtgttggcgcaacgggtcgcagacggaacctggaat
cagcgcgtgccgggcgatgtgtttatgtttgaaggcggcagcgcctggtttgccgacgat
gcgagtgcggaattgcctgcacggttggcaacgcaagccatccacccgaccggcgtgttg
tggggacgtggcgaattgcccacagcaggcgaagcacgcgagttagaagccgaacaagcc
gcacgtttcccgatcttttgcgccgggttggaaaaacaggggctgaaacaggaacgccgt
gcattgcgtgtcaatgtgggtacggtggggtttgaggtggtggatgacagcaccttgcgc
ctgagttttgccttaccagcgggggcttatgccacggtggtgttggaacagttggggacg
tttgtggtgccgctacaaattcaagctcacgccgtgttgccgtag
DBGET
integrated database retrieval system
