Thiothrix subterranea: HMY34_09950
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Entry
HMY34_09950 CDS
T07831
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb03030
DNA replication
tsb03430
Mismatch repair
tsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMY34_09950
03430 Mismatch repair
HMY34_09950
03440 Homologous recombination
HMY34_09950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsb03032
]
HMY34_09950
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_09950
Enzymes [BR:
tsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMY34_09950
DNA replication proteins [BR:
tsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMY34_09950
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMY34_09950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
NarQ_GAF-like
Motif
Other DBs
NCBI-ProteinID:
QQZ29054
LinkDB
All DBs
Position
complement(2024892..2026001)
Genome browser
AA seq
369 aa
AA seq
DB search
MRLTQTREHLLESLQATLGAIEKRHTAPILENVLLRIQGNQSFWRGTDLELEIATHAPIM
DGADGEITIPARKLADICKSLPPESIVNIEVQADKRARVSAGRSRFELATLPASEFPELE
DIGDVHTLELPENTLKHLLEASSFAMANQDVRYYLNGLLLEVNPDGVRTVATDGHRLALC
FHTADMPGVEQSRQLIMPRKGVLELSRLLRNDCQVPVQVQSSQNHLRVQLDNLRFTTKLV
DGRYPDYRAAVPGGGQIQVDLDRKAFKDMLNRVAILSNEKFRGVRLSLSENSLKVEANNP
EQEIATDELDVHYTGKDFSIGFNVTYLLDAVNHLEGQTLRMHCNAPESSVLLTDPDDDTV
RNVIMPIRL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagactaacccaaacccgtgaacacctactcgaatccttgcaagccaccttgggggca
atcgagaaacgtcataccgcgcccattctggaaaacgtgttactgcgcattcagggcaat
cagtccttctggcgtggcactgacttggaactggaaattgccactcacgcacccatcatg
gatggcgctgacggcgagatcaccattcctgcccgcaaattggcggacatttgcaaatcg
cttccccccgaaagcattgtgaatatcgaagtccaagccgataaacgcgcccgcgtcagc
gctggacgcagccgttttgaactcgctaccctacctgccagcgaattcccagaactggaa
gacatcggtgatgtgcatacattggaattgccagaaaacacgctgaagcatttgttagaa
gcgtcgtcattcgccatggctaatcaagacgtgcgctattacctcaacggtttgctgttg
gaagtaaatcctgatggggtacgtaccgtagcaaccgatggacatcgcttagcattgtgt
ttccacacagcggatatgcccggtgtggagcaaagccgtcagttgattatgccccgcaaa
ggtgtattggaactgtcacgtttattacgcaatgactgccaagtgccagtacaagtacaa
agcagccagaaccacctacgggtgcaactggataatttacgcttcaccaccaagctggta
gacgggcgttaccccgattaccgcgcagccgttcccggtggtggtcagattcaagtggat
ttggatcgcaaagctttcaaggacatgttgaatcgggttgccattctctccaacgagaag
ttccgaggtgtacgcctgtcgttgagcgaaaacagcttaaaggtcgaagccaataaccct
gagcaagaaattgctaccgacgaattggacgtgcattacaccggtaaagatttcagcatt
ggctttaacgtcacttatctgttggatgcagtcaaccatttggaggggcaaaccctaaga
atgcactgcaatgcccccgaaagcagcgtgttactcaccgaccccgacgatgacacggta
cgtaatgttatcatgccgatccgtttgtaa
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