Thiothrix subterranea: HMY34_10405
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Entry
HMY34_10405 CDS
T07831
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00270
Cysteine and methionine metabolism
tsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HMY34_10405 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsb03000
]
HMY34_10405 (dcm)
03032 DNA replication proteins [BR:
tsb03032
]
HMY34_10405 (dcm)
03036 Chromosome and associated proteins [BR:
tsb03036
]
HMY34_10405 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tsb02048
]
HMY34_10405 (dcm)
Enzymes [BR:
tsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
HMY34_10405 (dcm)
Transcription factors [BR:
tsb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
HMY34_10405 (dcm)
DNA replication proteins [BR:
tsb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
HMY34_10405 (dcm)
Chromosome and associated proteins [BR:
tsb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
HMY34_10405 (dcm)
Prokaryotic defense system [BR:
tsb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
HMY34_10405 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
QQZ29143
LinkDB
All DBs
Position
2119380..2120567
Genome browser
AA seq
395 aa
AA seq
DB search
MKTLELFSGAGGLAKGLELAGFHHVKLVEFNKHACATLQANFGAEKVFVGDIRDFSYDGL
KGVDIVAGGPPCQPFSLGGKHQADQDHRDMFPYAINAIRELQPKAFIFENVKGLLRSSFA
DYFEYIVLRLTFPDYKPKFGLDWQLHLQLLRKLKYETHQGLKYKVAYQLVNAADYGVPQS
RERVFMVGIRDDLEVEWVFPAPTHSDSRLLWDKFVTGEYWEKYGLAHEQREQPNAAIQKQ
VNALKTRYGLFPPVLKPWQTVRDALGHLPDPRSDHAIPDHIFRDGARVYPGHTGSDHDLP
AKTLKAGGHGVPGGENMLRYRDGSVRYFTVHEAKLLQTFPADFYIEGAWGEAMRQIGNAV
PVHLSQTLGKALRTTLQQAKPAFEQTMPLAFAVGA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctggaactgttctccggtgcaggcggattggcaaaaggattggagcttgct
ggttttcatcacgtcaaattggtggaattcaataaacacgcttgcgccaccctgcaagct
aatttcggtgcggaaaaagtcttcgtaggggatattcgtgatttcagctacgacggcttg
aagggtgtggacatcgtagcaggtggcccgccctgtcagccgttttccttgggtggcaag
catcaggcggatcaggatcatcgcgatatgttcccctatgccatcaacgccattcgcgag
ctgcaacccaaagcgttcatttttgaaaacgtaaaaggcttattgcgctcatccttcgct
gattactttgaatacattgtgctacgcctgacctttcccgactataaacccaaattcgga
ttggattggcagttacacctgcaattactcagaaagctcaagtacgaaacccatcaaggg
ctgaaatacaaggtggcttatcagcttgtcaatgcggcggattacggtgtgccgcaaagc
cgtgaacgggtgttcatggtcggtatccgtgatgatctggaggtggaatgggtatttcct
gctccaacacattccgatagtcgcttgttgtgggacaaatttgtgacaggcgaatactgg
gaaaaatacggtttggcgcatgagcagcgtgaacagccgaatgcagcaatccaaaagcaa
gtaaatgcgctcaaaacccgttatggtttgttcccgcctgtgctgaaaccttggcaaacc
gtgcgtgatgcgttgggacatttgccagacccgcgctctgatcatgctattcctgatcac
attttccgtgatggcgcacgggtgtatccggggcatactggcagtgatcatgacttgcct
gccaaaaccttgaaagcgggtgggcatggcgtaccgggtggcgaaaatatgctgcgttac
cgtgatggctcggtgcgctatttcactgtgcatgaagccaagttgctgcaaaccttcccg
gcagatttttatatcgaaggcgcgtggggcgaagcaatgcggcagatcgggaatgccgtg
ccagtgcatttgtcccaaacactcggtaaggctttgcgcacaacattgcagcaagccaaa
ccagcgtttgaacaaacaatgccgttggcttttgcggtaggtgcatga
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