KEGG   Thiothrix subterranea: HMY34_11105
Entry
HMY34_11105       CDS       T07831                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tsb  Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:tsb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tsb02048]
    HMY34_11105
Enzymes [BR:tsb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMY34_11105
Prokaryotic defense system [BR:tsb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMY34_11105
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C T1R_D3-like ResIII DEAD HSDR_N_2
Other DBs
NCBI-ProteinID: QQZ29274
LinkDB
Position
complement(2262804..2266073)
AA seq 1089 aa
MARNFISEDDIERALLQKLQHLHGFDVLVCHTANPDDLNDGSQRRDKRDVILAERLREAC
ERLNPHIPASVVTEVVATLMDRRIALSPLKANQELDQFIRDGVPVTFEDAKGVKQHDFVR
LIDFNIPANNRYLAVAQLWIKSLGQAPKAAYRRPDVILYVNGLPLVFIELKNSNVKLRSA
FDDNLTNYLHDIPQLFHCNAFCILSNALETRVGSFTAGWEHFFHWLRVADEKEVVNRPQI
EAQGTSLEYAIAGLCERSRLLDYVENFVIYHKGSTKIIAQNHQFLGVNSAYQRFLQREQH
DGKLGVFWHTQGSGKSFSMIFYVRKIFRKVSGNFSFVVVTDRQDLDGQIYRNFLNTGTVQ
EEDAAQPSNAEEMRKFLGQNKKVMFTLIQKFRYDKGKAYPRLFDPNGGREVIVMVDEAHR
TQYQNLAENMRAGLKGAHFLAFTGTPLLGKERKTSAWFGGYVSEYNFQQAMDDKATVPLF
YEKRVPKVLIQNEDLSEEFCALLEDEELDAAQQDKLERKFATEMEVIKRDDRLDMIAQDI
VYHFPQRGYLGKGMVITVDKFTAVTMYDKVQQHWKAELKNLRGRINSTTNEVEKARLKKR
LEWMKSVEMAVVISDPKADEARFAQQKLDIKPHITRLDQLDTNGHDIEHNFKDPEHPLQL
VFVCAMWLTGFDAPTVSTLYLDKPMKGHTLMQTIARANRVASYSIQGYSGKPVEKQHGEI
VDYYNVFRNMKKALKDYAQGDTGETVPVQEKTELLVLLDDAVAQTLTFCRERDIDLNAVL
GTQDTFKNIAKFNAFTDILLGNEEWRKAFNVYDNTVTALYEACKPEIYQQAPRLDIAAIQ
YLRGVVDSLVEGADIEAVSQRIAELLDESVVVDDADEFRQREYSVEYRIIQKGRTWDLSK
IDFDKLREDFSTAQYKNIEIADMRAFIEAKLHNMMAQNSTRVAFAARLQAIIERYNAGSS
SADNYFDDLVHFTQAMQTEDERHVREGLSEDELELYDLLKKDKLTQTEEQRVKLAAKDLL
IRLLQEHPKVLVQDWWKDSQTQLAVKNAIEDVLDKDLPDSYDRVTFKTKCDNVFALVLDF
AANRRKWAA
NT seq 3270 nt   +upstreamnt  +downstreamnt
atggcaagaaattttatatccgaagatgacatcgagcgggctttgttgcaaaagctgcaa
cacttgcacggtttcgatgtactggtgtgccacaccgccaaccccgacgatctcaacgac
ggttcgcaacgccgtgacaagcgcgatgtgattctcgccgagcgtttacgggaagcctgc
gaacgcttgaatccgcacattcccgccagcgttgtcaccgaggtggtggcaacgctgatg
gatcgccgtatcgcgctttcaccgctcaaagccaatcaggaactcgatcagtttatccgc
gatggcgtacccgtcacttttgaagatgccaagggcgtgaaacaacacgacttcgtgcgc
ctgatcgacttcaacatacccgccaataaccgctacctcgccgtggcgcaattatggatc
aagtcattggggcaagccccgaaagccgcgtaccgccgcccggatgtgattttgtacgtc
aatggcttaccgctggtgttcattgagttgaaaaattccaacgtcaaattgcgcagtgcg
tttgacgacaacctgaccaattacctgcacgatattccgcaactgttccactgcaatgcg
ttttgcattctctccaacgcgctagaaacccgcgtgggcagctttaccgccggttgggaa
catttcttccattggttgcgggtggcggatgaaaaagaagtggtcaaccgcccgcaaatc
gaagcgcaaggcacgtccttggaatacgctatcgcgggtttgtgtgagcgcagccgcttg
ctggattacgtggaaaacttcgtgatttaccacaagggcagcaccaaaatcattgcgcaa
aaccaccagtttctgggggtgaacagtgcctaccagcgtttcctgcaacgtgagcagcac
gacggcaaactgggggtattttggcacacccaagggtcgggcaaaagtttttcgatgatt
ttttacgtgcgcaaaatcttccgcaaggtcagcggcaatttcagctttgtggtggtgacg
gatcggcaggatttggacgggcagatttaccgcaacttcctgaataccggcacggtgcaa
gaagaagatgccgcgcaacccagtaacgccgaagaaatgcgcaagtttctggggcagaac
aaaaaggtgatgttcaccctgatccagaaattccgctacgacaagggcaaagcctacccg
cgcctgtttgaccccaacggcggacgcgaagtcattgtgatggtggatgaagcgcaccgc
acccaataccaaaatctggcggaaaacatgcgtgccggactcaagggcgcacatttcctc
gctttcacgggtacgccactgttgggcaaagaacgtaaaaccagtgcatggttcggcggt
tacgtctcggaatacaacttccagcaggcgatggacgataaagccaccgtgccactgttc
tacgaaaagcgcgtccccaaggtattgattcagaatgaggatttgagcgaagaattctgt
gccttgctggaagacgaggagctggatgcggcgcaacaggacaagctggaacgcaaattc
gccactgaaatggaagtgatcaaacgcgacgaccggctggatatgattgcgcaagacatc
gtgtaccacttcccgcagcgtggttatctgggcaagggcatggtgattaccgtcgataaa
ttcaccgccgtgaccatgtacgacaaagtgcagcagcattggaaagctgaactgaaaaac
ctgcgcgggcgcatcaatagcaccaccaatgaagttgaaaaagcccgcctgaaaaaacgg
ctggaatggatgaagtcggtggaaatggcagtggttatcagcgatcccaaagccgatgaa
gcgcgtttcgcccagcaaaagctcgacatcaaaccgcacattacgcgactcgaccagttg
gataccaacggtcacgatattgagcacaatttcaaagaccccgaacacccgctgcaactg
gtatttgtgtgcgctatgtggctgaccggatttgatgcgcccaccgtttcaacgctgtac
ctcgacaaaccaatgaaaggccacaccctgatgcaaaccatcgcccgtgccaaccgcgtc
gcgtcttacagcattcagggttacagcggcaaacccgtggaaaaacagcacggtgaaatc
gtcgattactacaacgtgttccgcaatatgaaaaaagcgttgaaagactacgcgcaaggc
gacactggcgaaaccgtgccggtgcaggaaaaaaccgaattgctggtgttgttggatgat
gcggttgcccaaacgctgaccttttgccgtgagcgtgacattgacctgaatgctgtactg
ggtacgcaagacactttcaaaaatattgcgaaattcaacgcttttaccgacattttgctg
ggcaatgaggaatggcgcaaagccttcaacgtctacgacaacactgtgactgccttgtac
gaagcctgcaaaccagagatttaccagcaagcaccacggctggacattgccgcgatccaa
tacttgcgcggggtggtggatagcttggtggaaggtgcagatattgaagccgtcagccag
cgcattgccgaattgctggatgaaagcgtggtggtggatgatgccgacgagtttcgccag
cgtgaatacagcgtggaataccgcattatccaaaaagggcggacgtgggatttaagcaag
atcgacttcgacaagctgcgcgaagatttcagcacagcgcaatacaagaatatcgaaatt
gcggatatgcgggcattcattgaagccaaattgcataacatgatggcgcaaaacagcaca
cgggtggcgtttgcggcacgcttgcaggcgattatcgagcgttacaatgcaggcagttca
tccgccgacaactattttgacgatttggtgcatttcacccaagcgatgcaaaccgaggat
gaacgccatgtgcgcgaaggcttgagcgaggatgagctggagctttacgatctgttgaaa
aaagacaagctcacccagacggaagaacagcgggtgaaactggcggcaaaagacctgctg
atccgcttgctccaagaacaccccaaagtcttggtgcaagattggtggaaagacagccaa
acccagctcgcggtgaaaaacgcaattgaggacgtgctggataaggatttacccgacagc
tatgaccgcgtgacctttaaaaccaaatgcgacaacgtgtttgcgttggtgctggacttt
gcggctaatcggcgtaagtgggctgcctaa

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