Thiothrix subterranea: HMY34_11740
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Entry
HMY34_11740 CDS
T07831
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
HMY34_11740
Enzymes [BR:
tsb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HMY34_11740
Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HMY34_11740
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
PurL_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QQZ29389
LinkDB
All DBs
Position
complement(2389064..2391022)
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AA seq
652 aa
AA seq
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MSRLLLTLMCCALSSTPPALAESPENSRMQRQLFQQTYSDLQAGNPDTFAALPAAMRQYP
LYPWLEYTDLKQRLDTLPDATVLDFIRRNPDSLMADALNIQLAKRLAAKQDWQTLLATIP
ATLDDTDTQCYRTQALAAVGQKDAALELGKKTWMSISKSLSDACIPVTDLLRRHVMLSTS
DYWERIRAALDKNQTTLATQLAAALPPEAQMAVTTWIQIREAPAAALPAAMQQPDNAYLR
DAIAFGLERLAKKESQQAEALWQTARQTLKFTPEESAKVESALGIQQALRHDPAALKRLA
AIPAAQRTQDANLWLARTAARQGEWKTLLDATQHLQFEHERDAAGWHYWQARALEQTGKK
AKATTLYTQIAPQATFYGFLAADRLGQTYTSLKTPAVDRSQRIAGLQKVAAIQRAFEWFA
LGNREQGRKEWFRALKQMDKEGALAAADLAIRSNDHNLAIWTVARAKEWDETHLRFPVVH
TDLVMAQARNQGIQPAWVMGVIRRESAFDATVESSAKALGLMQLIPSTAKAVGTKLGLNI
KGRDDILPPATNIQLGSAYLREMLGKFSGNYAQATAAYNAGPGRPPQWAPQQLINADQWI
ESIPFTETREYVQAVMGYTTIYDEKLNPGKGRRLSERLQPIAPHAPKPAPSP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagccgactgcttctcacgttgatgtgttgcgcgttatccagcaccccgcccgcccta
gcggagtcgccggaaaactcacggatgcagcgccaattatttcagcaaacctacagcgac
ctgcaagccggaaatcctgacacgtttgccgcacttcccgctgcgatgcgccaatacccg
ctttacccttggctggaatacaccgatcttaagcagcgcctcgacaccttgcccgatgcc
acggtactggattttatccgccgcaatcctgattcgctgatggctgatgcgctcaatata
caactcgccaaacgccttgccgccaaacaagactggcaaaccctgcttgccaccattccc
gcgacgctggatgacaccgacacccaatgctaccgcacccaagcactcgctgccgtgggg
caaaaagacgccgcactggaactgggtaaaaaaacttggatgagcatcagcaaatcgctt
tcagacgcttgcatccctgtcactgacttattgcgccgccatgtcatgctttccaccagc
gattactgggaacgcattcgagccgcactcgacaaaaatcaaaccacgcttgcgactcaa
ctggcggctgctttgccacctgaagcgcaaatggcggtcacgacctggatacaaatccgc
gaagcacccgccgccgcgctccccgctgccatgcagcaaccggataacgcttacctgcgc
gatgcgattgcttttgggctggaacgccttgccaaaaaagaatcccagcaagccgaagcc
ctctggcaaaccgctcgccaaaccctaaaatttaccccagaagaaagcgctaaagtcgaa
agcgcattgggcatacaacaagccctgcgccatgaccccgctgcgctgaaacgccttgcc
gccatccctgccgcacagcgcactcaagacgcgaatttgtggctggcacgcaccgccgcc
cgtcaaggtgagtggaaaaccttgctggatgccacccaacacctgcaattcgagcacgaa
cgtgacgccgccggttggcactattggcaagcccgcgccctcgaacaaaccggcaaaaaa
gccaaagccaccacgctttacacccaaattgccccgcaagccacgttctatgggtttctt
gctgccgaccgtttggggcaaacctacaccagcctgaaaaccccagccgttgaccgcagc
cagcgcatcgccggattgcaaaaagtcgccgccatccaacgcgctttcgagtggtttgcc
ctaggcaaccgcgaacaaggccgcaaagaatggtttcgcgccctcaaacaaatggataag
gaaggtgctcttgctgccgctgatctcgccatccgcagcaatgaccacaacctcgccatt
tggacagttgcccgcgccaaagaatgggatgaaacccacctgcgcttccccgtggtacac
accgacttggtcatggcgcaagcccgcaaccaaggcattcaacccgcttgggtcatgggg
gtcattcgccgtgaaagtgcctttgatgccacggtcgaatccagcgccaaagcccttggt
ttgatgcaactgattccctccacggcaaaagcggtcggcaccaaactgggcttaaacatc
aaggggcgcgacgatatactgccgcccgccaccaatattcagctaggcagcgcgtattta
cgtgaaatgctcggcaaattttccggcaactacgcgcaagccactgccgcctacaacgcc
gggcccggtcgccccccgcaatgggcaccgcaacaactgattaatgccgatcaatggatc
gaaagcatccccttcaccgaaacccgcgaatacgtgcaagccgtcatgggctacaccacg
atttacgatgaaaaactgaatccgggtaaaggtcgccgcctgtccgaacgtttacaaccg
atagcaccccatgcacccaaaccagcgccaagcccctaa
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