Thiothrix subterranea: HMY34_11925
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Entry
HMY34_11925 CDS
T07831
Symbol
rodA
Name
(GenBank) rod shape-determining protein RodA
KO
K05837
peptidoglycan glycosyltransferase [EC:
2.4.99.28
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMY34_11925 (rodA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsb01003
]
HMY34_11925 (rodA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
HMY34_11925 (rodA)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsb03036
]
HMY34_11925 (rodA)
Enzymes [BR:
tsb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HMY34_11925 (rodA)
Glycosyltransferases [BR:
tsb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HMY34_11925 (rodA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tsb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
HMY34_11925 (rodA)
Chromosome and associated proteins [BR:
tsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HMY34_11925 (rodA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
QQZ29421
LinkDB
All DBs
Position
2428918..2430030
Genome browser
AA seq
370 aa
AA seq
DB search
MINSLLPSWLIVALQRVDAVLLAVLSLLVFLGLATLYSASDGNMEQVQRQMVHFSIGLGL
LVLFSQISSKTLRQWSIWLYGIGVVLLVLVLIIGVTKKGATRWLYIGVDIQPAEIMKLAV
PMMVAYYFSEKPLPPRFIDIVIALLLVLVPMLLVMKQPDLGTSLLIATSGFFVIYLAGMS
WWLIGGAIAFVTVAAPLLYFFGMHDYQRRRVDTLLNPESDLLGTGYHIYQSKIAIGSGGA
YGKGWMQGDQAHLDFLPERHTDFIFAVFGEEFGLVGNLILMGLYLFIIWRGLYLASKGED
TFARLLGGSLSVSFFFYLFVNTGMVSGMLPVVGVPLPLVSYGGTSVVTLMMAFGIIMGMK
KRKRIYQRDG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgattaacagtttgttgccttcgtggttgattgtcgcgttacagcgggtggatgcggta
ttgctggcggtattgtcgttattggtgttcttggggttggcgacgctctacagtgccagt
gatggcaatatggagcaggtgcaacggcaaatggtgcatttttcgattggcttgggtttg
ttggtgctgttctcgcaaatttcgagcaaaaccctgcggcagtggtcgatctggttgtac
gggattggtgttgtgttgctggttttagtgctgattatcggggtcactaaaaaaggggca
acccggtggttgtacattggggttgatatacagcctgcggaaatcatgaaattagcggtg
ccgatgatggtggcgtattacttttctgagaaaccgctgccgcctcgttttattgatatt
gtgattgcactgttgttggtgttagtgccgatgctgttggtgatgaagcagccggatttg
ggaacgtctttgctgattgcgacgtctggctttttcgtgatttatctggcgggaatgtcg
tggtggctgatcggcggggcgattgcttttgtgacggttgcagcgcctttattgtacttt
tttgggatgcacgattaccaacgcaggcgagttgatacgcttttgaatccagaatcggat
ttgttgggaactggataccatatttatcagtcaaaaattgcgattggttctggtggggct
tatggaaaaggttggatgcaaggcgatcaggcgcatctggacttcctacccgaacggcac
acagacttcatttttgcggtttttggtgaagaatttggcttagtcggtaatttgatttta
atgggcttgtacctgtttattatctggcggggcttatatttagccagcaagggcgaagat
acttttgcgcgtctactgggcggcagtttgagtgtgtcattcttcttttatctgtttgtg
aataccggcatggtcagcggaatgctgccggtggtaggtgtgccgttaccattagtgagc
tacgggggaacctcggtggttacgctgatgatggctttcggtatcattatgggaatgaag
aaacgtaaacgcatttatcaacgggatggctga
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