Thiothrix subterranea: HMY34_12955
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Entry
HMY34_12955 CDS
T07831
Symbol
nifB
Name
(GenBank) nitrogenase cofactor biosynthesis protein NifB
KO
K02585
nitrogen fixation protein NifB
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99982 Energy metabolism
HMY34_12955 (nifB)
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Nitro_FeMo-Co
Fer4_12
Pox_Rap94
Motif
Other DBs
NCBI-ProteinID:
QQZ29605
LinkDB
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Position
2621767..2623302
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AA seq
511 aa
AA seq
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MELTVLGQSQTTAPAAGGCASSGCGSNDDQLNHLPEHIRAKVHNHPCYSEEAHHHYARMH
VAVAPACNIQCHYCNRKYDCSNESRPGVVSELLTPDQAVKKVMTVAANIPQMTVLGIAGP
GDPLANPERTFDTFRQLTEKAPDIKLCVSTNGLALPELVDELCKHNIDHVTMTINCVDPD
IGAQIYPWIFWKNRRVYGRKGAEILIKQQQKGLQMLVDRGILVKVNSVMIPGVNDKHLEE
VSKAVKAKGAFLHNVMPLIAEAEHGTFYGVMGQRGPTHDELQELQDACSGDMNMMRHCRQ
CRADAVGMLGEDRGDEFTMDKIEAVDVDYAAAMVKRAEVHAAIEATLAAKAKAKVETQNL
ASLQTAFVSLSSLTLPKKESRPVLMAIATSGGGIINQHFGHAREFLIYEANAHDVRFISH
RKTDLYCSGDETCGDGESVLQKTINALKGCEVVLCSKIGYEPWGMLEEAGIIPNGEHAME
AIEDAVAAVYKEMGEKGLLDKKPETKQRATA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactgttttagggcaaagccaaaccaccgcccccgctgccgggggctgcgcc
tccagcggttgcgggagcaacgacgaccaactgaaccacctgccggaacacatccgcgcc
aaggtgcataaccacccgtgctactccgaagaggcacaccaccattacgcccggatgcac
gttgcggtagccccggcctgcaacatccagtgccactattgcaaccgcaaatacgactgt
tccaacgaatcgcgccccggcgtagtttccgaactgctcacccccgatcaggcggtgaaa
aaagtcatgaccgtcgcggcgaacattccgcaaatgaccgtgctgggcatcgcaggcccc
ggcgacccgctcgccaacccggaacgcaccttcgacaccttccgccaactgaccgagaaa
gcgccggacatcaagctgtgcgtgtccaccaacggtctggcactgccggaactggtcgac
gaactgtgcaaacacaatatcgaccacgtaaccatgaccatcaactgcgttgaccccgac
atcggcgcacaaatttacccgtggattttctggaaaaaccgccgcgtctacgggcgtaaa
ggtgcggaaatcctcatcaagcagcagcaaaaagggctgcaaatgctggtcgatcgcggc
attttggtcaaggtcaactcggtcatgatccccggtgtcaacgacaagcatctggaagaa
gtcagcaaagcggtcaaagccaaaggcgcattcctgcacaacgtcatgccgctgattgcc
gaagccgaacacggcacgttctacggcgtgatggggcaacgcggcccgacccacgacgaa
ttgcaggaactgcaagatgcctgttccggcgacatgaacatgatgcgccactgccgccaa
tgccgcgccgatgcggtcgggatgctgggcgaagaccgtggtgatgaattcacgatggac
aaaatcgaagccgtggatgtcgactacgccgctgcgatggtcaaacgcgccgaagtccac
gccgccatcgaagccaccctcgccgccaaagcaaaggccaaggtagagacgcaaaatctt
gcgtctctacagactgcgttcgtttcgctgtcttccctgacgctgccgaaaaaggaatcc
cgcccagtcctgatggcgattgccacctctggcggcggcatcatcaaccagcacttcggt
catgcgcgtgaattcctgatttacgaagccaatgcccacgacgtgcgcttcatcagccac
cgcaaaaccgacctgtattgcagcggcgatgaaacctgcggcgacggcgaaagtgtcctg
caaaaaaccatcaacgcgctgaaaggctgcgaagtggtgctgtgttccaagatcggctac
gagccgtggggaatgctggaagaagccggaatcatccccaatggcgaacacgccatggaa
gccatcgaagacgcggttgccgccgtctacaaggaaatgggcgaaaaaggcttgctcgac
aagaaaccggaaaccaagcaacgcgccaccgcgtaa
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