Thiothrix subterranea: HMY34_13140
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Entry
HMY34_13140 CDS
T07831
Symbol
nifM
Name
(GenBank) nitrogen fixation protein NifM
KO
K03769
peptidyl-prolyl cis-trans isomerase C [EC:
5.2.1.8
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tsb03110
]
HMY34_13140 (nifM)
Enzymes [BR:
tsb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
HMY34_13140 (nifM)
Chaperones and folding catalysts [BR:
tsb03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
HMY34_13140 (nifM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
SurA_N
SurA_N_3
Motif
Other DBs
NCBI-ProteinID:
QQZ29638
LinkDB
All DBs
Position
complement(2657414..2658295)
Genome browser
AA seq
293 aa
AA seq
DB search
MPNLSFAIMGKPPAYRYHLLRNALEAFQKNLPHLDEKEFNRVCQRADRSFHLESLALQSP
EASQILIQPERVDMALQEIADRYPNDEDFTIDLSQNGLTPDTLRQALQRELLFDGILQKV
ASRSITIGDIDVQLYYEMNRERFMQPETRLVRQILITVNNDYVDNQYDTVLQRIRSIAAQ
ATGNAKQFGKLARQYSECPTAMEGGKLGNLPYGKLYPQLDAALFALSAGQVSAPIETELG
FHLLLCEHIYPAQQVSLTKAKAQIRTQLQERAQRNCQKEWLKQLQATTPEVSP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacctaagcttcgccatcatgggcaagccgcccgcttaccgttaccacctgcta
cgcaatgcactggaagccttccagaaaaacctgccgcatctggacgaaaaggaattcaac
cgtgtctgtcaacgcgccgaccgcagttttcacctcgaatcactcgccctgcaaagcccc
gaagccagccaaatcctcatccagcccgaacgggtcgatatggcactgcaagaaatcgcc
gaccgctaccccaacgacgaagacttcaccatcgacctcagccagaacggtttaaccccc
gacaccctgcgccaagccctgcaacgcgagttactgttcgatggcatcctgcaaaaagtc
gcctcccgcagcatcaccatcggcgacatcgacgtacagctttactacgagatgaaccgc
gaacgtttcatgcagccggaaacgcgactggtgcggcaaatcctcatcaccgtcaacaac
gattacgtcgacaaccagtacgataccgtgctgcaacgtatccgcagcattgccgcgcaa
gccactggcaatgccaaacaattcggcaagctggcacgccaatattcggaatgccccacc
gcgatggaaggcggcaaacttggcaacctgccctacggcaaactctacccacaacttgat
gccgcgctgttcgccctgagtgcggggcaagtcagcgcccccatcgaaaccgaactcggt
ttccacctgttgctgtgcgaacacatctaccccgcgcaacaagtctccctgaccaaagcc
aaagcgcaaatccgtacccagttgcaagaacgcgcccaacgcaactgccagaaagaatgg
ttaaagcaattgcaagccaccaccccggaggtatccccatga
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