Thiothrix subterranea: HMY34_14015
Help
Entry
HMY34_14015 CDS
T07831
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMY34_14015 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_14015 (xth)
Enzymes [BR:
tsb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HMY34_14015 (xth)
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HMY34_14015 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QQZ29799
LinkDB
All DBs
Position
2822375..2823193
Genome browser
AA seq
272 aa
AA seq
DB search
MRIISANTNGIRSAAKKGFFEWMKQQQADVVCIQETKAQIHQLEEDRALFFPEGYHCYYH
DAEKKGYSGVAIYARTEPDAVISGMGCAEFDAEGRYIEARFGNLSVISLYLPSGSSGEER
QQAKYRCMDYFLPLLVQMKADGRDLVICGDWNIAHQNIDIKNWKGNLKNSGFLPDERAWL
DKLFNELGFVDGFREVNQEAEQYTWWSNRGQAWAKNVGWRIDYQILTPSLKGKVSAAAIY
KDERFSDHAPLSLDYAYEIPCRTVLGAESYTG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataatctccgctaacaccaacggcatccgttctgctgcgaaaaaaggcttcttc
gagtggatgaagcagcagcaggcggatgtcgtgtgcatccaagaaaccaaggcgcaaatt
caccagttggaagaggatcgcgctttgttttttcctgaaggctatcactgctactaccat
gacgccgaaaaaaagggctatagtggtgtggcaatttatgcccgtactgagccggatgcg
gtgattagcggaatgggatgtgctgaatttgatgcggaagggcgttatattgaagcgcgt
ttcggcaatctgagcgtgatttccttgtatttgccgtcaggttcatcaggggaagagcgt
cagcaggcgaagtatcggtgcatggattattttttgccgttgctggtacaaatgaaggct
gacgggcgcgacttggtgatttgcggtgattggaacattgcgcatcagaacatcgacatt
aagaactggaaaggcaacctgaaaaattccggtttcttaccagacgaacgggcttggttg
gacaagctgttcaatgaattgggttttgtggatggtttccgtgaagtgaatcaggaagcc
gaacagtatacctggtggtcgaatcgtgggcaggcgtgggcaaaaaacgttggctggcgg
attgattaccagattcttacgccatcactgaagggtaaagtgagcgcagcggcgatttac
aaggacgaacgcttctccgatcatgctcccctgagtttggattatgcttatgaaattcct
tgtcgcactgttcttggtgctgagtcttacacaggctaa
DBGET
integrated database retrieval system
