KEGG   Thiothrix subterranea: HMY34_15615
Entry
HMY34_15615       CDS       T07831                                 
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tsb  Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:tsb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tsb02048]
    HMY34_15615 (cas3)
Enzymes [BR:tsb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HMY34_15615 (cas3)
Prokaryotic defense system [BR:tsb02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    HMY34_15615 (cas3)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD ResIII Helicase_C AAA_19 PhoH AAA_30 UvrD-helicase AAA_25 DUF1003 Cas3_C
Other DBs
NCBI-ProteinID: QQZ30075
LinkDB
Position
3163758..3166433
AA seq 891 aa
MDVKPYFRYWGKAKPGQDEAGAQWHLLPYHSLDVAAVAAVWLDSSSVIRRRFSTIAQSDE
QHVVAWLKFFVALHDLGKFDIRFQLKVPDLLKDLCAESALPLPSANISRNYWHGEYAHFW
AYHDLAERLQWKPPANFWDEMEGEKLWEAWQPWIQAVAGHHGKEPTNFNGQDEPWGVSPA
ILAHDKQARLEFITEIEALFLKPAGLSISDQPPVCDVLFLAGFCSVCDWLGSTTHNRDGE
IRFGYQSTDEKPADYFNKRVPIARTLLEESGLLVKVVTVGGMAEVFSQFKTPQQVQTLVD
VLPIQQGLTLIEAPTGSGKTEAALAYASYLLAEGMAESIVFALPTQATANAMLDRLLEVA
DRLFEQTDMVLAHGKAGFNPRFIDLKRGASRHTPQDEQNELEASVHCARWLGQSRKRAFL
GQMGVCTVDQVLVSVLPVKHRFVRSFGLGKSVLIIDEVHAYDSYMYGLLNKVLKQQRAMQ
GSVILLSATLPLQQREALVAAWGGQADVFSPQDEYPMITCVGVVKPECFTLPDSEKQRLA
QLPVREVQVSWDEAADMLPDDILQQRIVAAAETGANVVVICNLVADAQALKISLSGKTSL
PVDLFHSRFRFRDRQTKEQTVLDAYGKGEKRKQGGVLVATQVVEQSLDLDFDWMITQLCP
IDLLFQRLGRLHRHERVRLEGFEQPQCTVLLPQNQQYELHKLIYGNKNAPNSRVLWRTER
KVRDNPIMVFPLVYRPMIEAVYQEEAWEDEPGAIVSEYERFWKEDYASYLKANLITDVHA
VWDDDDSNVSLLTRDGEMSLNIIPVVETSADQCFLGNTRLISALEEWQRAEEVMLNTIPA
PASWKKQGLPSEKEGVIWLVMLAASEGRWECVTDKARFSYTADTGLTMEQR
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggatgttaagccgtattttcggtattggggtaaggcgaagccggggcaggatgaggcg
ggggcgcaatggcatttgttgccgtatcattcgttggatgtggcggcagtggctgctgta
tggctagattcaagttctgtcattcgacgacgttttagcactattgcgcaatctgatgag
cagcacgtggtggcgtggttaaagttttttgtcgcactccatgatcttggaaaattcgat
attcgtttccagcttaaagtacccgatttgctcaaagatttgtgtgcagagtctgcatta
cctttgccatccgctaatatttcaaggaattattggcatggtgaatatgcacatttttgg
gcatatcacgatcttgctgaacgtttgcaatggaagcccccagcaaatttctgggatgag
atggagggtgaaaagctttgggaggcatggcaaccgtggattcaagccgttgctgggcat
catggcaaagagccaactaattttaatgggcaagatgagccttggggcgtttctcccgct
attttggcgcatgataaacaagcccgacttgagttcattactgagattgaagccttattc
ctgaagcctgctgggttatctatttcggatcaaccacccgtctgtgatgtgttgtttctc
gccggattttgttcagtctgtgattggctaggttcaacaacgcataaccgggatggtgaa
atacgatttggttatcaatcgactgatgaaaaaccagcagattacttcaacaagcgtgtg
ccgatagctcgcacattattggaagagagcggtttgttagtcaaggttgtaactgttggt
ggcatggcagaggttttttctcaatttaaaacaccccagcaggtgcaaacactggtggat
gtattacctatccagcagggtctgacactgattgaagcacccacaggttcaggaaaaacg
gaagcggcacttgcttacgccagttatttgctggctgaaggtatggcagaaagcattgtg
tttgccttgccaacgcaggcaacagcaaatgcgatgttagaccgtttacttgaagtggca
gataggttatttgaacaaactgacatggtgctggcacatgggaaagcaggttttaatccg
cgctttattgatttaaaacggggggcatcaaggcacacaccacaagatgagcaaaacgaa
ttggaagccagtgtgcattgtgcccgttggttgggtcaaagtaggaagcgggcttttctt
ggccagatgggtgtctgtacggtcgatcaggtattagtgtcggttttgccggtcaaacac
cgttttgtgcgtagcttcggtttgggaaaaagtgtactgattattgacgaagttcatgcc
tatgacagctacatgtatgggttattgaataaggtattgaagcaacaaagagctatgcag
ggcagtgttattctattatcggctactttgcccttacaacaacgtgaggcattggtcgcc
gcgtggggcggtcaagctgatgtgttttcaccgcaagatgaatacccaatgattacctgt
gttggtgttgtaaagcctgaatgctttacgctacccgattcagaaaaacaacggcttgcc
caattgccagtgcgggaggttcaggtaagttgggatgaagccgctgatatgctacccgat
gacatcttacaacagcgtattgttgccgccgctgaaacaggggcaaacgtggtggttatc
tgcaatttagtggctgatgcacaagcattaaagatcagtttatcagggaaaacctcattg
cctgtcgatttgtttcattcacggttccgtttcagagatcggcaaacgaaggagcaaacg
gtgttggatgcttatggcaagggtgagaagcgtaagcagggtggggttctggttgctacc
caagtggttgagcaaagtcttgatctggattttgactggatgattacccagctttgccca
atagatttgttgttccaacgcttggggcgtttgcatcgacatgagcgtgtaaggcttgag
gggtttgaacagcctcaatgcacagtgctattaccgcagaatcaacagtacgaattacac
aagctgatttacggcaataaaaacgcaccaaactcacgagttttatggcgcacggagcgt
aaggttcgtgataacccaatcatggtgtttcctttggtgtatcgccccatgattgaggct
gtttaccaagaagaagcatgggaggatgagccaggggctattgtctctgagtatgaacgg
ttttggaaagaagactacgccagttatttaaaagcgaatctgatcacagatgttcatgcg
gtttgggatgacgatgatagtaacgttagcttactaactcgtgatggtgaaatgagcttg
aacattattcctgttgttgaaacctcagcagatcaatgttttttggggaatacccggctg
ataagtgctttggaggagtggcagagggcagaggaggtcatgctgaatacgattccagcc
cctgcttcatggaaaaagcagggattgcccagtgaaaaagaaggggtcatctggctggtg
atgttggcagcttctgaagggcgttgggaatgtgtgactgacaaggctagattcagttat
accgccgatactggcttgacgatggagcaacgttaa

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