Thiothrix subterranea: HMY34_15820
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Entry
HMY34_15820 CDS
T07831
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tsb02044
]
HMY34_15820
02035 Bacterial motility proteins [BR:
tsb02035
]
HMY34_15820
Secretion system [BR:
tsb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HMY34_15820
Bacterial motility proteins [BR:
tsb02035
]
Pilus system
Pilus assembly proteins
HMY34_15820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
VWA_2
VWA
Motif
Other DBs
NCBI-ProteinID:
QQZ30111
LinkDB
All DBs
Position
3199658..3203353
Genome browser
AA seq
1231 aa
AA seq
DB search
MKKIRCSLRWLLLTAPLLFATVLMADETEIYFTDKSGEVAPNVLFVIDASGSMSQVVTGD
ADSRTRLQVLKSSFQEVMNTAPTNLNVGLMHYANHGLGEDYWWSSIKGANFPVSPIDAAV
QPLIATHQSDDNLPNPATGTTVVREFLSSIVNSWEANGYTPIVDSLYEAARYFRGDTVEW
GMDVPSIGWAAHPLTYDNAPTCTASHQADCVKSWGQCNTNIVPGSCSAISTNECCDWITT
GGDGSGYCKDDNYTCSTVIEKCKHTVCDTVEGAPTYKSPIQYSCQANYLVLMSDGKPEYP
YFPGLGDTDGTRYYPPSVKNLAMSDFNPMPAPDWTTYFTGLIAANNSQIKVAPPLQDYLG
AAANNCGTTAAAPRGYNSGRCGPELTRWLADTDHSSTLEGKQKVETYTVAFALGDEPTGT
AYLSDLATKEDGAFTADNAEELAGAFKAILSSISKASSSFSSPTYAIDTKNMLAHSDEVY
IPMFDRSSTAVWSGNLKKFARTVDGKIVGGTLIRDDENRVTGGDPVVNDKGEFLDTADDL
WGPPSGSDVTSGGAASQLPAPDSRNLYTDVSIDSDLTDAKNALSTSNTDNLTDGKLLGLP
ENPAEKVKYWLPDADGDGTSCLGYYTDCDGKKHIVLGNYETKVGCITISSVAITCPATDY
LTDPERDTLINFARGEMDDPTSSDPAVTIPRKQMGDMLNSKPLVVDYGDGEQRIFAATNE
GFLHSINTADGEEQWAFMPKNLLPNIKTFMENLPTKDHVYGIDGPLTLWNYDTNMDGELK
ATDGDKRVLFFGLRRGGKAYYALDITNPDSPLILWKKDNTLTVDDNAWNELGETWSKPSL
AKMRIGSSTSSQVRNVLVFGAGYDASKDAETGRQPDQIGNDVMIVDALTGELHWSLQRDV
YGGNAATNPVKHSVPGDIRVLDMDRNGTLDRLYFADTGGNLWRVDMDHDLRDSDPDMYNY
DDAVLTKIAELGENGDHGTDTRKFFYEPDTALIQHNGKVHMTISLGSGYRTHPLNTNTED
RFYVLMEPNVYNEPPADFVTLTNTDLVNAKTGFTDPNDNLLNGTHKGWYYDFTHKGEKVL
APAVTFLNKVVFTTFVPVDEAGQEPPDDPCIVPPNSARAYVLDLFTGKAVADLDRDSATG
NSGKDEFVVAGFNEILDAAKIIFRMPSAADGGDCAAGDCQQTVEIRVGKLEMPILDESNH
EPGTGIGGVTGSVDLTDILPRMFWLDHNVTD
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatacgttgtagcctgcggtggctgttgttaaccgcacccctgttattcgcc
actgtcttaatggcagacgaaaccgaaatctacttcaccgacaaaagcggtgaagtagcg
cccaacgtactgtttgtgattgacgcatcgggcagcatgagccaagtcgtaaccggcgat
gccgatagccgtactcgcctacaggtgttgaaatcctcctttcaagaggtgatgaacacc
gcgcccaccaatttgaatgtgggtttaatgcactacgctaaccacgggttgggcgaagat
tattggtggagttcgattaagggtgcaaacttccccgtttccccgattgatgcggcggtt
cagccgttaattgccacccaccaatctgacgataatttaccgaaccctgcaaccggcacc
acggtagtgcgcgaatttctctccagcattgtcaacagttgggaagccaacggctatacg
ccgattgttgattccttgtacgaagccgcgcgttattttcgcggcgatacggtggaatgg
ggcatggatgttcccagcattggctgggcagcgcacccgttaacctatgacaatgcgccc
acttgtaccgcttcccatcaagccgattgcgtgaagagttgggggcaatgcaacaccaat
attgtgccgggcagttgtagcgccatcagcaccaacgaatgttgcgactggatcaccacc
ggcggtgacggctcaggttattgcaaagatgacaattacacctgttcgacagtcatcgaa
aagtgcaaacacaccgtctgcgataccgttgagggtgctcccacctacaaatccccgatt
caatacagttgccaagccaattacttggtcttaatgtcggatggcaagcccgaatacccc
tattttcccggcttgggggatacggacggcacgcgctattacccgccttccgtgaaaaat
ctagcgatgagtgatttcaaccccatgcccgcgcccgattggacgacttacttcaccggc
ctgattgccgccaataacagccaaatcaaagtagcgccgccattgcaggattatctgggg
gctgccgccaacaattgtggcacgactgccgccgcaccgcgcggttacaacagcgggcgt
tgtgggccagaattaacccgctggttggcggacacggatcacagcagcaccttggaaggc
aagcaaaaggtggaaacctacaccgtcgcctttgcgctaggcgatgagccaaccggtacc
gcctacttgagtgatttagcaaccaaagaagacggcgcatttaccgccgacaacgcggag
gaattagccggtgcattcaaagcgattctaagttccatcagcaaagcctcgtcatcgttc
agttcccccacgtatgccatcgacaccaaaaacatgttggcacacagcgatgaagtctac
attccaatgtttgaccgcagtagcacggcggtgtggtcaggcaatttgaaaaaattcgcc
cgcaccgtggatggtaaaatcgtcggcggaacgctaatacgtgatgatgaaaaccgcgta
acgggtggtgatccggtggtgaatgacaagggcgagtttttggatacggcggatgatttg
tgggggccacccagtggttccgatgttaccagtggtggcgctgccagccagttacctgcg
ccggatagccgcaatttgtacaccgatgtgagtattgacagcgatttgactgatgcgaaa
aacgctctgtctactagcaataccgacaatttaaccgatggtaaattgctgggtttgccc
gaaaatccggcggaaaaggtcaaatattggctgcctgacgccgacggtgatggtaccagt
tgtttaggctattacacggactgcgacggtaaaaaacacattgttttgggtaattacgaa
accaaagtcggctgtatcacgatttccagtgtagccattacctgtcccgcgaccgattat
ttgacagaccctgagcgcgacaccctgattaactttgcacggggtgaaatggatgacccc
actagcagtgacccggcggtgacgattccgcgtaaacaaatgggggatatgctgaatagc
aagcctttggtggtggattacggtgatggcgagcagcgcattttcgcggcgactaatgaa
ggtttcttgcactccatcaatacagcggatggcgaagaacaatgggccttcatgccgaaa
aatttgctgcccaacattaaaacctttatggaaaatctaccgaccaaagaccacgtttac
ggcattgatggcccgctaaccttgtggaattacgacacgaatatggacggtgaactcaaa
gccaccgacggcgataagcgcgtcttgttctttgggttgcggcgtgggggcaaagcttat
tacgccttggatattaccaaccccgatagcccgttaattttgtggaaaaaagacaatacc
ctcacggttgacgataacgcttggaatgaattgggcgaaacttggtcgaaaccttccttg
gcaaaaatgcgtattggcagctcgacctccagtcaagtacgcaatgttttggtcttcggc
gcgggttacgatgcctccaaagatgctgaaaccggtcgccaacccgaccaaatcggcaat
gacgtcatgattgtggatgccttaaccggtgaactgcactggtcattgcaacgcgatgtc
tacggtggaaacgcagctactaatccggtcaaacacagtgtccccggtgatattcgggtc
ttggatatggatcgcaacggcacactcgaccggctgtatttcgcggacaccggcggcaat
ttgtggcgcgtggatatggatcacgatttgcgtgacagcgacccggatatgtacaactac
gatgacgcagttctcaccaaaattgcggaattgggtgaaaacggcgatcacggcacggat
acccgcaagttcttttacgaacccgatactgcactgattcaacacaatggcaaagtacac
atgacgatttccttgggcagcggctaccgcacgcaccctttgaataccaacaccgaagac
cgtttctacgtgttgatggaaccgaatgtgtacaacgaaccgccagccgatttcgtgacg
ctgactaacaccgatttggtgaatgctaaaaccggtttcactgatccgaacgataatttg
ctcaacggcacgcacaaaggttggtattacgacttcacgcacaaaggtgaaaaagtactc
gcgcctgcggttacattcctcaacaaagtcgtctttaccacgtttgtgccggtggatgaa
gctgggcaagaaccgccggatgacccatgcatcgttccccccaacagcgcccgcgcttat
gtgctggatttgttcaccggcaaagccgttgctgaccttgaccgcgacagcgcgacaggc
aacagtggcaaagatgaatttgtggtggcaggtttcaacgaaatcttggatgccgccaaa
atcatcttccgtatgcccagtgctgcggatgggggtgattgtgccgccggtgattgccaa
caaacggtggaaattcgagtcggtaagctagaaatgccgatcttggatgaaagcaatcac
gaacccggcaccggtatcggtggcgtaacgggcagcgttgatttgactgacattttaccg
cgtatgttctggttggatcacaatgtgactgactag
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