Thiothrix subterranea: HMY34_16015
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Entry
HMY34_16015 CDS
T07831
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsb03029
]
HMY34_16015 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_16015 (bamA)
Mitochondrial biogenesis [BR:
tsb03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
HMY34_16015 (bamA)
Transporters [BR:
tsb02000
]
Other transporters
Pores ion channels [TC:
1
]
HMY34_16015 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
POTRA_2
YqfD
ShlB
Motif
Other DBs
NCBI-ProteinID:
QQZ30146
LinkDB
All DBs
Position
3246461..3248752
Genome browser
AA seq
763 aa
AA seq
DB search
MKKHTLVISAVSCLLAVSQAVWAAAFVVRDIEVNGLERIAAGTVLNYLPAQVGQPFNDAQ
SAEAIRTLFQTGLFEDVQLGRRGDVLVVTVVERPAIGELTIKGNRKIPTDKLMEVLKLRN
ISKGNTLDKAALATIQRELAEQYQGMGHYGVDINTAIEALPRNRVAVNININEGNVARIQ
KVKIIGNKAFPESVLLKQLESGPRGAFSIPFLSDSDKYSKEKLMADLDALNSFYRDRGYI
NFEIASADVSMSPDKKDIFLNVSVNEGAQYRIGDVSVAGNPGLSKEQLAKSVKLRKGEVF
SQKALEETRKNLSNQLGAQGYAFTKVAATPDFDENNKQVGILLSVDQGKRTYVRRIDIRG
NNRTKDEVYRRELRQVESSWFSKEQVERSKTRLQRLPYVEEATIEVEPVAGTEDQVDLIV
TVNERSSNQFRVGAGYSQSQGVLFNVNLNQDNFMGTGKKLDVNVDNSKVNKNYSIGYTNP
YYTPDGISRGFSGYYKEYDAEAEDIASYASNRYGGSVNYTVPLSEHDSVYASVGAEKREI
VLGTAPAQRIKDFVDTNGDEYNQLPVTVSYVHDTRNRTVFPTEGQRHRVSLQTAVPGSDL
EYHKLNYDGAAYKPITDNVTFAVKGKVGTSTTGGDLDNLPFFDKYYAGGINSVRGFDQSS
LGSRDENDDPTGGDLLVTATAEVQFPVPLAEDVKGLKMSAFVDGGNVFDDTGDFKADEMR
YSAGVGAVWLSPIGPLEVSYAKPLNAEETDKEQKVQFSIGASF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacactcttgtaatttcggctgtaagctgtctgttggcagtttctcaagcg
gtttgggctgctgccttcgtagtccgcgacattgaagtgaatggtttggaacgcattgcc
gccggtacggtattaaattacttacccgcccaagttggtcaaccgtttaatgatgcgcaa
tcggctgaagcgattcgtacattattccagacgggtttgtttgaagacgtgcaacttggt
cggcgtggcgatgtgttggtggtgacggtggtggagcgccccgctattggtgaattgacc
attaaaggcaatcgcaaaattcctaccgataagttaatggaagtgttgaaactgcgcaat
atcagcaaaggcaatactcttgataaagcggccttggcaaccattcagcgcgaattggcg
gaacaataccaaggcatggggcattacggcgttgatattaatactgcaattgaagctttg
ccgcgcaatcgggtcgccgttaatattaatattaacgaaggcaatgtggcacgtattcaa
aaagttaaaattatcggcaataaagcttttcccgaatcggtattgctgaaacaattggaa
tcagggccacgcggggcgttttcgattccctttttgagcgatagcgacaagtattccaaa
gaaaaactgatggcggatttggatgcgctcaacagtttctaccgtgaccgtggttatatc
aattttgaaatcgcttcggctgatgtgtcaatgtcgccggataaaaaagatattttcctg
aatgtcagcgtgaacgaaggagcgcaataccgcattggtgacgtgagtgtcgcgggaaat
cctggtttatccaaagaacaattggctaaatcggttaaattacgcaaaggtgaagtgttt
tcacaaaaagcgttggaagaaacccgtaaaaacctttccaatcagcttggtgcgcaaggt
tatgcgtttaccaaagtggcggcaaccccggattttgatgaaaacaataagcaagtaggt
attttgctgtccgtcgatcagggtaagcgcacgtatgtccgccgcatcgacattcgtggt
aataaccgtaccaaagatgaagtgtaccgccgtgaattgcgtcaggtagaaagttcgtgg
ttctcgaaagagcaggtggagcgttccaaaacccgcttgcagcgcctgccttacgttgaa
gaagccacgattgaggtagaaccggttgctggtacagaagatcaggtagatttgattgtc
accgtgaatgagcgttcttctaaccaattccgggtgggggcgggttattcacaatcgcaa
ggcgtgttattcaacgttaaccttaaccaagataacttcatgggaaccggtaaaaagctg
gatgtgaacgttgataacagcaaggtcaataaaaattacagcatcggttataccaatcct
tattatacgcctgatggtattagccgtggtttcagcggttattacaaagaatacgatgct
gaggcggaagatattgccagctatgcgtctaatcgttacggcggcagcgtcaattatacc
gtgccattgagtgagcatgattcggtatacgccagcgtcggtgcggaaaagcgtgaaatt
gtgttgggtactgccccggcgcagcgcattaaagatttcgtcgataccaacggtgatgaa
tacaatcaattgccagtgacggtcagctatgtgcatgacacccgcaaccgtaccgttttc
ccaactgaaggccagcgtcatcgggtttctttgcaaacagccgtgccgggtagcgatttg
gaataccacaaattgaattatgacggtgctgcttataaacccattaccgataatgttacg
ttcgcggtaaaagggaaagttggtacgagtacgacgggcggtgatctcgataatttaccg
tttttcgataaatactacgcgggcggcattaacagtgtgcgtggttttgaccagagttca
ttgggttcacgtgatgaaaacgatgatccaaccggcggtgatttgttagtgacggcgacg
gctgaagtgcaattccctgttcctttagcagaagatgtgaaaggcttgaaaatgagcgcc
ttcgtggacggcgggaatgtgtttgatgataccggtgattttaaagcggatgagatgcgt
tattccgctggtgtaggcgcggtctggttatcgccgattggcccgctggaagtcagttat
gcgaaaccgttgaatgctgaagaaacggataaagagcagaaggtacaattcagtattggg
gcatcgttctaa
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