Thiothrix subterranea: HMY34_16040
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Entry
HMY34_16040 CDS
T07831
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00540
Lipopolysaccharide biosynthesis
tsb01100
Metabolic pathways
Module
tsb_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HMY34_16040 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tsb01005
]
HMY34_16040 (lpxB)
Enzymes [BR:
tsb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
HMY34_16040 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
tsb01005
]
Lipid A
HMY34_16040 (lpxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QQZ30150
LinkDB
All DBs
Position
3251571..3252725
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AA seq
384 aa
AA seq
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MKRIAIIAGEASGDLLAARLILALRELRPELVFEGIAGSEMQAAGCTSLFPMEKFSVMGL
VEVLPRLPELLAIRKQLLQRWQANPPDLFIGVDAPDLNLPIAKKLHALGIPTVHYVSPSV
WAWRAKRVRKMRGNLDLMLTLFPFEVDFYREHGIPAVFVGHPLADEVSFNADRQSAREQL
DLPLTKPLLAILPGSRLGEVRRLAPDFFKAALQLQQQYPELRLATPAATPRLRQELETIR
QDIAPELILKVLNGQSRTLMQAADHILLASGTAVLEGMLAGRLMVAAYRVAPLTAWLIRT
FKLLKVRFVTLPNNLAGEELVPELLQEQVTPANLVQALERLFNLPAERQQYILQRFQALH
AQLRQNASASAAHAILTHFPTKKS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatagccatcattgccggagaagcgtcaggtgatttactggcggcgcgtctg
atccttgccttgcgcgaacttcgccctgaactggtgtttgaagggattgcaggcagtgaa
atgcaggcggcgggttgcaccagtttattcccgatggaaaaattttcggtcatggggctg
gtggaagtgttgccgcgcttgcccgaattattggctatccgcaaacaactgctgcaacgt
tggcaagcaaatccgccggatttattcattggcgtggatgcgcccgatttaaacctgccc
attgccaaaaagttacacgcactcggcattcccacggtgcattatgtcagcccgtccgta
tgggcatggcgtgccaaacgggtgcgcaaaatgcgtggcaatcttgatttaatgctgacc
ttattcccatttgaagtggatttttaccgcgagcatggcattccggcggtgttcgtcggg
catccattggcagatgaagtaagcttcaacgcggatcggcaaagcgcccgtgagcaattg
gatttgccgctgaccaaaccgctgctggcgattttgccgggcagtcgcttgggtgaagtg
cgccgtctcgccccggattttttcaaagccgccttgcaattgcagcaacaataccctgaa
ttacgcttagcaacacccgccgcaacgccgcgcttgcggcaagaattggaaacgattcgg
caggatattgctccagaactcatccttaaggtattgaacgggcaatcccgcaccttaatg
caagcggcggatcacattctattagcgtctggaacggcggtgttggaaggcatgttagcc
ggacgtttgatggtggcggcttatcgggttgcaccattgactgcttggctgattcgcacc
ttcaaattgctcaaagtccgatttgttaccttgccgaataatcttgctggtgaggagctt
gtgccggaattgttgcaagaacaggtgacacctgcgaatctggtacaggcgttagaacgt
ctatttaacctacccgctgaacgccagcagtatattttgcaacgttttcaggcattgcac
gcgcaactacgacaaaacgcgagtgccagcgccgctcatgctatccttacccattttccg
accaaaaaatcctag
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