Thiothrix subterranea: HMY34_16080
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Entry
HMY34_16080 CDS
T07831
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00220
Arginine biosynthesis
tsb00240
Pyrimidine metabolism
tsb00250
Alanine, aspartate and glutamate metabolism
tsb01100
Metabolic pathways
tsb01110
Biosynthesis of secondary metabolites
tsb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HMY34_16080 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HMY34_16080 (carB)
00220 Arginine biosynthesis
HMY34_16080 (carB)
Enzymes [BR:
tsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HMY34_16080 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
ATP-grasp_2
Usp
Motif
Other DBs
NCBI-ProteinID:
QQZ30157
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Position
3260719..3263949
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AA seq
1076 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNM
ADAIYIEPIRWETVAKIIEKERPDALLPTMGGQTALNCALDLSRQGVLEKFGVDMIGANE
VSIDMAEDRQKFKVAMDEIGLESARSGVAHTMDEARAVQATLGFPVVIRPSFTMGGSGGG
IAYNKQEFETIVARGLDMSPTTEVLLEESLLGWKEYEMEVVRDRNDNCIIICSIENLDPM
GIHTGDSITVAPAQTLTDKEYQLLRNASIAVLRKIGVDTGGSNVQFSVNPKDGRIIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIP
RFTFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLETGIDGLNERIDPQDPDA
KDTLRRQLTEASSERILYVADAFRLGMSIEELFAQTSIDPWFLVQIKELVDLENGLKDRL
LNSLSSDEMRALKRKGFSDRRLAKLLHETEKTVRAARHKLNVRPVYKRVDTCAAEFATNT
AYMYSTYEEECESNPTDRKKIMVLGGGPNRIGQGIEFDYCCVHAALALRDDGFETIMVNC
NPETVSTDYDTSDRLYFEPLTLEDVMEIVDLEKPYGVIVQYGGQTPLKLARDLEALGAPI
IGTSPDSIDLAEDRERFQQLIHKLGLKQPPNRTARSIDEAVRLADEIGYPLVVRPSYVLG
GRAMEIVYHENELRRYMTTAVSVSNDSPVLLDRYLDDAIEVDVDAICDGENVLIGGIMQH
IEQAGIHSGDSACSLPPYSLRADIQDQLREQMAQMGKALNVIGLMNAQFAIKGDDVYVLE
VNPRASRTVPFVSKAIGRPLAKVAARCMAGQSLASQNALNEIIPSYYAVKEAVFPFIKFP
GVDPILSPEMKSTGEVMGVGRTFAEAFGKAQYAAGEVYPTSGVAFISVREADRRHLKEVG
DMLIGQGFKIVATRGTARELQNVGVTCEIVNKMREGRPNIVDMIKNEEIDLIVNTTEGEQ
STRDSFEIRREALQHKITYTTTIEGARALCKAMAYTDSEQVYCLQDLHQEITEQGV
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcactgacattaaaagcattctgattattggtgcaggcccgatcattatc
ggtcaggcgtgcgaattcgactattccggtgcgcaagcgtgtaaggcgctgcgtgaggaa
ggctaccgcgtcattttggtcaattccaaccccgcgaccattatgaccgaccccaacatg
gcggatgcgatttacatcgagccaatccgttgggaaaccgtcgccaaaatcattgaaaaa
gaacgccctgacgcgctactgcccacaatgggtgggcaaactgcgctcaactgtgcgctc
gacctttcccgccagggcgtgctggaaaagttcggcgtggacatgattggtgcgaacgaa
gtctccatcgacatggcagaagaccgccagaaattcaaagtagcgatggatgaaatcggt
ctggaatccgcccgttccggcgtagcccatacgatggacgaagcccgtgcggtgcaagcc
acccttggcttccccgtggttattcgcccctcgttcacgatgggcggcagcggcggcggt
attgcctacaacaagcaggaatttgaaaccatcgtggcgcgtgggctggatatgtctccg
accaccgaagtcctgctggaagaatccctgctcggctggaaagagtatgaaatggaagtc
gtgcgtgaccgtaacgacaactgcatcattatctgttccatcgaaaaccttgacccgatg
ggcatccacaccggcgactcgatcacggtagcgccagcgcaaaccttgaccgacaaggaa
taccaattgctgcggaacgcctccatcgcggtcttacgcaaaatcggtgtggataccggc
ggttctaacgtgcagttttcggtcaatccgaaagatgggcgcattatcgttatcgaaatg
aacccacgggtgtcacgttcttccgcactcgcctccaaagccaccggcttcccgattgcg
aaagtggcggcgaaactggcggtcggctacaccttggatgaattgcgcaacgagattacc
ggtggggcaacgcctgcgtcgttcgagccatccatcgactacgttgtcaccaaaatcccg
cgtttcaccttcgagaaattcccgcaagctgactcgcgtttgaccacgcaaatgaagtcc
gtgggcgaagtcatggcaatggggcgcactttccaagagtcgttccagaaagccctgcgc
ggtttggaaaccggtattgatggcttgaacgagcgcattgatccgcaagaccctgatgcg
aaagatacgctgcgccgccaactgaccgaagccagttccgaacgtattttgtacgtcgca
gatgccttccgtttgggcatgagcattgaagagctgttcgcgcaaaccagcatcgacccg
tggttcttggtgcaaatcaaagaactggttgaccttgaaaatggtttgaaagaccgcttg
ctcaatagcctgtctagcgacgaaatgcgggcattgaaacgcaaaggcttctctgaccgc
cgtttggctaagctgttgcacgaaaccgagaaaacggtacgggcggcacgtcacaagctc
aatgtgcgcccagtgtataagcgcgtcgatacctgcgcggcggaatttgcaaccaatacc
gcgtacatgtattccacctacgaagaagagtgcgaatccaaccccaccgaccgtaagaaa
atcatggtgctgggtggcggccccaaccgtatcggtcaagggatcgaattcgactactgc
tgcgtccacgcggcgttggcgttgcgtgatgatggctttgaaaccatcatggtcaactgc
aaccctgaaactgtttccaccgattacgacacctctgaccgtctgtatttcgagccgctg
acgctcgaagacgtgatggaaatcgtggatctggaaaaaccttacggcgtgatcgtgcaa
tacggtgggcaaaccccgctgaaattggcacgtgatttggaagcattgggtgcgccgatc
attggtacatcgccggattccatcgacttggcggaagaccgcgagcgtttccaacaactg
attcacaagcttggcttgaagcagccgccgaaccgcactgccagaagcatcgacgaagcg
gtacgcttggcagacgaaatcggctatccgttagtcgtgcgtccgtcttacgtgctgggt
gggcgggcgatggaaatcgtttaccacgaaaacgaattgcgccgttacatgaccacggca
gtatccgtgtccaatgattctccggtattgctcgaccgttatttggacgatgccatcgaa
gtggacgttgacgcgatttgcgacggtgagaacgtgctgatcggcggcattatgcagcac
atcgaacaggcgggtatccactccggtgactcagcgtgttctttaccaccgtattccttg
cgtgcggacatccaagaccaattgcgtgagcaaatggcacagatgggcaaagccctcaac
gttatcggcttgatgaacgcgcaatttgccatcaaaggcgacgacgtatacgtgctggaa
gtaaacccgcgtgcctcacgtaccgtgcctttcgtgtccaaagcgattggtcgtccgctg
gcaaaagtggcggcacgttgcatggctggtcaaagtttagcgtcgcagaatgcgttgaac
gaaatcatcccgtcctactacgcggtgaaagaagcggtattcccgttcatcaaattcccc
ggcgttgatccaatccttagccccgaaatgaaatccacgggcgaagtcatgggcgtgggc
aggacgtttgccgaagccttcgggaaagcgcaatacgcagcgggcgaagtttacccaacc
tctggcgtggcgttcatcagtgtgcgcgaagcagaccgccgtcacctgaaagaagtgggt
gatatgctgatcgggcaaggcttcaaaatcgttgccacccgtggcacggcacgcgaattg
cagaacgtcggtgtaacctgcgaaatcgttaacaaaatgcgcgaaggccgccccaatatc
gtcgatatgatcaagaacgaggaaatcgacctgatcgtgaacacgaccgaaggcgaacag
tcgacccgcgactcgtttgagattcgccgcgaagccttgcagcacaaaattacctacacc
accacgattgaaggtgcgcgggcattgtgcaaagcgatggcctacactgacagtgagcag
gtttattgcttacaagatttacatcaggaaataacagaacaaggggtttga
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