Thiothrix subterranea: HMY34_16480
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Entry
HMY34_16480 CDS
T07831
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsb03032
]
HMY34_16480 (gyrA)
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_16480 (gyrA)
Enzymes [BR:
tsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMY34_16480 (gyrA)
DNA replication proteins [BR:
tsb03032
]
Prokaryotic type
DNA Topoisomerases
HMY34_16480 (gyrA)
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMY34_16480 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4851
Motif
Other DBs
NCBI-ProteinID:
QQZ30227
LinkDB
All DBs
Position
3338833..3341415
Genome browser
AA seq
860 aa
AA seq
DB search
MATFAKEIIPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNEWN
KPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSLRYMLVDGQGNFGSVDGDSPAAM
RYTEVRMSKIAHELQMDIDKETVDFVPNYDGNEKEPSVFPTRLPNLLINGSSGIAVGMAT
NIPPHNLTETVNACLALLADPDMDISDLMEYLPGPDFPTAGIINGARGIRDAYHTGKGRI
YVRARANVEVDERTHRETIIVTELPYQVNKARLLEKIADLVKEKKLEGISELRDESDKDG
MRMVIELKRGESGDVIINNLYKQTQMQSVFGINMVALIDGQPRLLNLKDILAAFLRHRRE
IVTRRTIFEVRKARERAHILEGLAVALSNIDDIITLIKSAPSPADAKLGLVARAWNAGIV
SDMLSRSGADTCRPDDLPEQYGLRSDGYWLSEVQAQAILDLRLHRLTGLEKDKIIAEYRE
LLEKIADLLEILGNPDRLLQVIRDELLLVRDTYGDARRTEINVVGEDLCMEDLIADEEVM
VTFSHAGYAKAQTLDTYRAQKRGGRGKAATAMKDEDFIEKLFVASMHDTLLCFSSRGRMY
WLKVYQLPMGGRGARGKPMVNLLPLEEGERINAVLPIREYAEDKYIFMATSEGTVKKTPL
TDFSRPRTAGIIAVDLRDGDQLVDVAVTNGDSEVMLFSTSGKAIRFHESDVRAMGRTAAG
VRGIRMDEGQEVNALIILGEGELLIATENGYGKRTRAEEFSQQGRGGQGVIAIQTSDRNG
NAVGAVQVREDCQIMLITDGGTLVRTPVADVSIVGRNTQGVTLIRLNDEEKLVQIAPILT
DVTDENADVIEDDADVGGSE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggccacatttgccaaggaaattatcccggttaatctcgaagatgaaatgcgccagtcc
tatttggactacgcaatgagtgtcattgttggacgtgcgttaccggatgtgcgcgacggt
ttgaagcccgtccaccgccgcgtgttgtttgcgatgagcgaactcggcaacgaatggaac
aagccctacaaaaaatccgcgcgtatcgtcggtgacgtgatcggtaaataccacccgcac
ggtgataccgccgtgtacgacacaatggtgcggatggcgcaaccgttctcgctgcgctac
atgctcgtggatggtcaagggaactttggttctgtggatggcgattcgcctgcggcgatg
cgttacaccgaagtgcgcatgtccaaaattgcccacgaattgcagatggacatcgacaaa
gaaaccgtcgattttgtccccaactatgacggcaacgagaaagaacccagcgtgtttccc
acgcgcttgcccaacttgctgatcaacggttcatccggtatcgcggtcgggatggcgacg
aatattcccccgcacaatctcaccgaaaccgtgaatgcgtgcctcgcgttgctggctgat
cccgatatggacatcagcgatttgatggaatacctgccggggcctgatttccccaccgcc
ggtattatcaatggcgcacgcggtatccgcgacgcttaccacaccggcaaagggcgcatt
tacgtccgcgcccgtgccaatgttgaagtcgatgaacgcacgcaccgtgaaaccatcatc
gtcaccgagttgccgtatcaggtgaacaaggcgcgtttgctggaaaaaattgccgatctg
gtcaaagagaaaaagctcgaaggcatttccgaattgcgcgacgaatccgacaaagacggg
atgcgcatggtgattgaactcaagcgcggcgaatccggcgatgtgatcatcaataacctc
tacaagcaaacccagatgcagagcgtattcggcatcaatatggtagcgttgatcgacggt
caaccgcgtttgctgaacttaaaagacatactggcagccttcctgcgtcaccgccgcgaa
atcgtcacgcgccgcaccatttttgaagtacgcaaagcccgcgaacgcgcccacatcctc
gaaggtttagcggttgcgctctccaatatcgacgacattattaccctgatcaaatccgcg
cctagccctgccgatgccaaactcggtttggtggcacgcgcttggaatgcaggcattgtc
agcgatatgttgagccgttccggtgcggatacctgccgcccagacgatttgcctgagcaa
tacggtttgcgctctgacggttattggctctccgaagtacaagcccaagcaattttggat
ttgcgcttgcaccgtctgacaggtttggaaaaagacaagatcattgccgaataccgcgaa
ttgctggaaaagattgccgatttgctggaaatcctcggcaatcctgaccgtttgctgcaa
gtgattcgtgatgaattactgttggtgcgcgatacctacggcgatgcgcgtcgtaccgaa
atcaacgtggtcggcgaagacctgtgcatggaagacctgattgctgacgaagaagtcatg
gtcacgttctcgcacgcgggttacgccaaagcgcaaacgctggacacttaccgtgcgcaa
aaacgcggcgggcgcggcaaagcggcgacagcgatgaaagacgaagatttcatcgaaaag
ctcttcgttgccagtatgcacgacaccttgctgtgcttctccagccgtgggcgcatgtat
tggctgaaagtttaccaattaccaatgggcggacgcggcgcacgtggcaagccaatggtt
aatttgctgccgctggaagagggcgaacgcatcaatgcagtgctgccaatccgcgaatac
gctgaagacaaatacatcttcatggcaacctccgaaggtacagttaagaaaacgccgttg
actgatttctcgcgtccacgcacggcgggcattatcgcggtggacttgcgcgacggcgac
caattggtcgacgtggctgtgaccaacggcgatagcgaagtcatgctgttcagcacctcc
ggcaaagcgattcgtttccacgaatccgatgtgagggcaatgggacggacggcggcaggc
gtgcgcggtatccgcatggacgaggggcaggaagtcaacgcgctgatcattttgggcgaa
ggcgaactgctgattgcgaccgaaaacggttacggcaagcgcacccgtgcagaagaattc
tcgcagcaagggcgcggcgggcaaggcgtgattgcgattcaaacctctgaccgcaacggt
aatgcggtcggtgcggtgcaagtgcgcgaagattgccagattatgctcatcaccgacggc
ggcacattggtgcgcaccccagtcgctgacgtttccatcgtcgggcgcaatacgcagggt
gtgaccttgattcgcctcaatgatgaggaaaagttggtgcaaattgcgccgattttgacc
gatgttactgatgaaaatgctgatgtcattgaagatgatgctgatgtaggtggatctgaa
taa
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