Thiothrix subterranea: HMY34_16790
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Entry
HMY34_16790 CDS
T07831
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_16790
Enzymes [BR:
tsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HMY34_16790
DNA repair and recombination proteins [BR:
tsb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HMY34_16790
Prokaryotic type
HMY34_16790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QQZ30278
LinkDB
All DBs
Position
complement(3404756..3406153)
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AA seq
465 aa
AA seq
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MTIAIVWLRQDLRLADNPALYQACRTCEQVIPVFIDDPLPSSISQLGAASRVWLHHSLQA
LDTHLQTLGNRLILRQGAALPVLQQLIANTGATHVYWNRVYDPASLARDKHIKETLKQTC
EVHSFNASLLNEPWEVLKADGTPYKVFTPFWKAMLKHGIQHLPLPTPERMVAPANLPDSL
PLDALGLLPTIRWDTAMMTHWEVGEAAAMQKLLAFLPQGADYKEARNLPAQTGTARLSPH
LHFGEISPRQAVYHTEHYLQTHPEADSGLRHFVQEIGWREFSYHLLYHFPHTQERALDAR
FDVFPWADDYAAVLNRWQQGQTGFPIIDAGMRELWQTGWMHNRVRMIVASLLTKNLLVPW
QVGEQWFRDTLVDADLASNVFGWQWTAGCGADAAPYFRIFNPILQSQKFDPEGEYIRRWV
PELHARDNKQVHLPRELGDGLRDYPLPVVDLKISRERALTLFKRI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcgattgtttggctacggcaagacttgcgtctggcggataaccctgcgctt
taccaagcttgccgcacttgtgaacaggttattccggtttttattgacgacccgctgccc
agttccatcagccaactcggtgcggcgagtcgggtatggttgcaccacagtttgcaggcg
ctcgatacgcacctgcaaacgctaggcaatcgcctaatcttacgccaaggcgctgccctc
cccgttttacagcaattgatcgccaacaccggcgcaacccatgtgtattggaatcgggtg
tatgaccccgccagccttgcccgcgacaaacacattaaagaaaccctcaagcaaacctgc
gaagtccacagctttaatgccagcctactgaatgaaccgtgggaagtcttaaaagccgac
ggcacaccttacaaagtgttcaccccgttttggaaagcgatgctgaaacacgggattcaa
cacttgccgctgcccacgccagaacgcatggttgcgcccgccaatttgccggatagtttg
cctctggatgcgttgggcttattgccgacaatccgctgggataccgcgatgatgacccat
tgggaagtcggtgaagcggcggcgatgcaaaaattgctggcattcttgccacagggtgca
gattacaaagaagcacgcaatctgcccgcccaaaccggcaccgcccgcctctcaccgcat
ttgcacttcggcgaaatcagcccgcgtcaggcggtttatcacaccgaacactatttgcaa
acacaccccgaagccgatagcggcctacgccattttgtacaagaaatcggctggcgcgaa
ttttcttaccacttgctgtatcactttccgcacacgcaggaacgggcgttggatgcacgt
ttcgatgttttcccttgggcagacgattacgccgctgtgctaaaccgttggcaacagggg
caaaccggctttcccattattgatgcggggatgcgcgaattgtggcaaaccggctggatg
cacaatcgggtacgtatgattgtggcatcattgctcaccaaaaacttgctcgtgccttgg
caagtgggggaacaatggtttcgggatacgttggtagatgctgatttagccagtaatgtg
tttggctggcaatggactgccgggtgtggggctgatgctgcgccatacttccgcattttc
aacccgattttacaaagccagaaatttgacccggaaggggaatacattcgccgctgggtt
ccagaattgcacgcacgggataataagcaggtgcatttgccgcgtgaattgggcgatggt
ttgcgggattatcccctgcctgtggtcgacttaaaaatcagccgtgaacgcgcattgacg
ctgtttaagcgcatttaa
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