Thiothrix subterranea: HMY34_17205
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Entry
HMY34_17205 CDS
T07831
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_17205
Transporters [BR:
tsb02000
]
Other transporters
Pores ion channels [TC:
1
]
HMY34_17205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
Ntox22
Autotransporter
Opacity
DUF5777
Motif
Other DBs
NCBI-ProteinID:
QQZ30353
LinkDB
All DBs
Position
complement(3490953..3491645)
Genome browser
AA seq
230 aa
AA seq
DB search
MKILLSCSVAGLALLANSVYAGGLEGYGAPSNVSLYGGLSAGLSSHDGACATDTTDCEDG
DTGHKAFVGLRADPNQNPSELWATPAGVMPASSLPTMGVELGYMELGENTAKGTAGREGI
YDSELQSELSASYVAGVGYVPVAPRTELLGKVGAAFWKQNGSKTVAEDSELDTTSTNSGV
SMLLGAGAQVKLNPNLSLRGEYERVLGTAADTDYEADASLLSVGAVFSTF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgctttcctgctcagtagcaggcttggcgctattggcaaatagtgtgtac
gcaggtggtctggaaggctacggcgcaccatccaatgtttcactatacggcggtttgagt
gcgggtctaagcagtcatgatggcgcttgcgcaaccgacaccactgactgcgaagacggt
gataccgggcataaagcctttgtcggtttacgtgctgatcctaatcaaaatccgagcgaa
ttatgggcaacgccagccggtgtcatgcctgcatcatccctgccgaccatgggtgtggaa
cttggttacatggaattgggcgaaaataccgcaaaaggcacggcgggacgtgaaggtatt
tacgacagcgaactccaaagcgaactctccgccagttatgttgcgggcgtaggctacgtt
ccggttgcgccacgcacggaattactgggcaaagtcggcgcagccttttggaaacaaaat
ggcagcaaaaccgtcgccgaagactctgaactggataccaccagcaccaacagcggcgtt
agcatgttattgggggctggcgcacaagttaagcttaaccctaacttgtcattgcgtggc
gaatatgaacgggtgcttggcaccgccgctgataccgattacgaagctgatgcgagctta
ttgagcgtcggtgcggttttttccaccttttaa
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