Thiothrix subterranea: HMY34_17210
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Entry
HMY34_17210 CDS
T07831
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_17210
Transporters [BR:
tsb02000
]
Other transporters
Pores ion channels [TC:
1
]
HMY34_17210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OprF
Porin_OmpG_1_2
Motif
Other DBs
NCBI-ProteinID:
QQZ30354
LinkDB
All DBs
Position
complement(3491688..3492311)
Genome browser
AA seq
207 aa
AA seq
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MTISNTAALAVCLFSVLSNTAMADNSSPFSKIKPMSPIGMNSNAKAPNYLGASIGTTTTD
GFCDPLGDCDNGDKSWKAFAGVRMNDNIVLEAGYVDFGKQSGTATTGEVSQQATAFTTAA
VAGIPMTDQIELFGKAGIARWTLEQTDSSGTVENTGTDVLVGVGADYNLGDNMGVRAEWE
RFKDVGDTAAHANDIDLLSLGFIFSSL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttccaacactgccgcgcttgccgtgtgcctattcagtgtactgagcaatact
gcgatggcagacaacagttcacctttttccaaaatcaaaccgatgtcacccattggcatg
aattccaacgccaaagcacccaactatttgggggcaagcatcggcacgaccaccaccgat
gggttttgcgatccacttggcgactgtgacaacggcgataaaagctggaaagctttcgcc
ggggtgcgcatgaatgacaatattgtgctggaagcaggctatgtcgattttggcaaacaa
agcggcacagctaccacgggtgaagttagccaacaggcaaccgctttcaccaccgccgcc
gtcgctggcatccccatgaccgaccaaatcgaactgttcggcaaagcgggcattgcacgc
tggacattggaacaaaccgatagcagcggcacggtagaaaataccggcacggatgtattg
gtcggcgtgggtgcagactacaacctcggtgacaatatgggcgtgcgtgccgaatgggaa
cgctttaaagacgtgggcgacaccgctgctcatgccaatgacattgacttgctgagtctt
ggctttattttctcatcgttataa
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