Thiothrix subterranea: HMY34_17230
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Entry
HMY34_17230 CDS
T07831
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
tsb
Thiothrix subterranea
Pathway
tsb01501
beta-Lactam resistance
tsb02010
ABC transporters
tsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMY34_17230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMY34_17230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMY34_17230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_17230
Transporters [BR:
tsb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
HMY34_17230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_22
AAA_29
nSTAND1
PRK
RNA_helicase
AAA_13
NACHT
AAA_5
ATP-synt_ab
NB-ARC
SMC_N
RsgA_GTPase
AAA
MMR_HSR1
Sigma54_activat
Spp-24
AAA_23
DUF87
Parvo_NS1
AAA_25
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QQZ30358
LinkDB
All DBs
Position
3494994..3495968
Genome browser
AA seq
324 aa
AA seq
DB search
MTAPQLAVRNLSVRFRLKTGQALQALTDVSFSVPAGETLGIVGESGCGKSTLARAILQLV
TPTQGTVEWQGNTLNPHDNASMKAYRRAVQCIFQDPLDALNPRMTVGDIVQEPLLALRPE
LGKAAIRQRAADLLQAVGLESGMHNRYPHEFSGGQCQRIGIARALSVEPQVIVCDEPVSA
LDVSIQGQVVKLLADLQRDHHLTLLFISHDLRVVRTLSQRVLVLYLGRIMEIADTARLYA
EPLHPYTRLLLAAIPLTDPQQERERLAQIRVGAGELPSPLNPPSGCVFHTRCPQAEAKCR
AQVPALREVTQGRWVACHFQDSDQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccacaactggcagtgcgcaacctcagcgtgcgtttccggctcaaaaccggg
caggcgttgcaggcgcttaccgacgtttcgtttagcgtgccagcaggggaaaccttgggg
attgtcggcgaatcgggttgtggcaaatccacacttgcccgcgccattttgcaattggtg
acacccacgcaaggcacagtcgagtggcaaggtaacacgctgaatccgcacgataatgcc
agcatgaaagcctatcgccgtgccgtgcagtgcatttttcaagacccattggatgcgctg
aatccgcgcatgacggtcggcgatattgtgcaagaaccgctccttgcgttgcgcccagaa
ttgggtaaggcggcgattcgccaacgtgctgctgatttactgcaagcggtgggcttggaa
agcggaatgcacaaccgttacccgcacgaattttccggcgggcaatgccagcggattggg
attgcgcgggcattgagtgtcgagccgcaagtgattgtatgcgatgagccggtgagtgcg
ttggatgtgtcgattcaagggcaagtcgtgaagttgttggcggatttgcagcgtgatcat
cacttgaccttgctgtttatttcgcacgatttgcgggtggtcagaactttgagtcagcgc
gtgttggtgctgtatttggggcgaattatggaaattgcggatacagcacgtttgtatgcc
gaaccgttgcacccgtatacgcgcctattgctggcggccattccgttgaccgacccgcag
caggagcgagagcggttagcgcagattcgcgtgggggcgggggagttgccttcgccgctg
aatccgccgtcggggtgtgtgtttcatacgcgctgcccacaggcagaggcaaagtgtcgg
gcgcaagtgcctgcgttgcgggaggtgacgcaaggcagatgggtggcatgtcattttcag
gattccgaccaatag
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