Thiothrix subterranea: HMY34_17735
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Entry
HMY34_17735 CDS
T07831
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsb03036
]
HMY34_17735 (smc)
Chromosome and associated proteins [BR:
tsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HMY34_17735 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
ERM_helical
BORCS7
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QQZ30446
LinkDB
All DBs
Position
3599897..3603457
Genome browser
AA seq
1186 aa
AA seq
DB search
MRLSKIRIAGFKSFVDPVTLDLRSNLTGILGPNGCGKSNTIDAVRWVMGESSAKHLRGAS
MEDVIFNGSSSRKPIGLASVELVFDNSDGTLGGEYASYAEISIKRQVSRDGDSKYFLNGA
KCRRRDITDIFLGTGLGSRSYAIIEQGMISRLIEAKPEELRHTLEEAAGISRYKERRRET
ETRMAHTRENLERLSDLRDELEKQLERLDKQAKAAQRFRDLRDQERQLEASALLLQWQHL
QADGAQRLRELSQLSNAYQAHLTQMQHLEMLLIDLRERYTDANETLNAVQGEYYQAGAEI
ARIEQSIQHQRDIERRQQDALRTAEQSIAETLRHAAEDRTKLSVSEAALADLIPREADLS
AQLAFAEERLAEAEDQLNDWQEHWHTLQQHIADPTRQAQVEKVRIEQLERQLSQTSQRLE
RLQQEANNLAPANVADDVQLLEAQREAAAEELALAEDQLANLSATLSQQQQAQRDLNSQI
DAQRSRRQSVQGRLASLETLQQSGLEKTNKARQQWLKEHALDTAPRIAEILKVEAGWETA
FEAVLGEDLDAICLKNPSPLTPHPAAFSVVPQGARGTDMFPNAGITLLNIEAPPAPSPLE
GESWGEGSLAHKLHAPAAAHSLVTGIHCAETLHEALSQRHTLVPGDSIITRDGVWLGINW
LRSRRQDEANGGILQRQQEIESLREQLERLETDLNAGQTRADAVRTGISTLEQQRQQAQA
DVNRWHRSESELRNRLHTLQQRIEQISKRRQQIDSECAELATQQQQQSAEHQQATIQRDT
ALALLATLQTERDQLAATREDWQHAVSDARRTQRDLQATIQDARLQIETHRTQRDNSQQQ
LERIHSRLELLEQQRETLLEQLQLQDDPLAELEEEREQALTQRADVEQRLTHARQQLQAL
EAEIRQQDSARIQTECLAETSRTALENRKLEWQSVQVREQTLAEQFAKTEFDAANLQAEF
PADASAETFLQALDSVQRSIQRLGAINLAAIDEFREQQERKHYLDQQNADLVTALETLET
AIRKIDRETRARFKETFDKVNSRLGEMFSRLFGGGECYLDMTGDDLLTTGVAIMARPPGK
RMSTIYLMSGGEKALTAVALVFAIFELNPAPFCLLDEVDAPLDEANVGRFCELVRHMSEQ
VQFIFITHNKTTMELAENLIGVTMREAGVSRLVTVDMAEAVKLANS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccttagcaaaattcgcatcgccggattcaaaagtttcgtggaccccgtgacgctg
gatttacgcagcaacctcaccggcattctcggccccaacgggtgtggcaagtccaacacc
attgacgccgtgcgctgggtcatgggcgaatcgtctgccaagcacttgcgtggtgcgtca
atggaagacgtgattttcaacggttcgtcctcgcgcaaacccattggcttagcctcagtc
gagctggtttttgacaatagtgatggcacgctgggcggcgaatacgccagttacgcggaa
atttcaatcaaacgccaagtcagccgcgacggggattccaaatatttcctcaatggcgcg
aaatgccgccgccgcgatattaccgatattttcctcggcacaggcttagggtcacgcagt
tacgcgattattgaacagggcatgatttcgcgcctgatcgaagccaaacctgaagaattg
cgccataccctcgaagaagcggctggcatttcacgttacaaagaacgccgccgcgaaacc
gaaacccgcatggcgcacacccgcgaaaatctcgaacgcctcagcgacttgcgcgacgaa
ctcgaaaaacaactggaacgcctcgacaaacaagccaaagccgcgcaacgtttccgcgac
ttgcgcgaccaagaacgccaactcgaagccagcgccctattattgcaatggcaacacctg
caagcggacggtgcgcaacgcctgcgcgaactgagtcagctttccaatgcgtaccaagca
cacctcacccagatgcagcatctggaaatgctcctcatcgacttgcgtgaacgttacacc
gatgccaacgaaaccctgaacgcggtacagggcgagtattaccaagcgggagcagaaatc
gcccgcattgaacaaagcatccaacaccagcgtgacattgagcgtcgccaacaggatgcc
ttgcgcactgccgaacagagcattgccgaaaccttacgccacgctgccgaagaccgtacc
aaactcagcgtgagcgaagcggcacttgctgatctcattccgcgtgaagccgatctcagt
gcgcaattggccttcgccgaagaacgccttgccgaagccgaagaccaactcaatgactgg
caagaacactggcacacgttgcaacaacacatcgccgaccccacccgccaagcgcaagtc
gaaaaagtccgtattgaacaactcgaacgccaactgagccaaaccagccaacgcctagag
cgcttgcagcaagaagccaacaaccttgcccccgccaacgttgccgatgacgtgcaattg
ctggaagcgcaacgcgaagccgccgccgaagaactcgcgcttgccgaagaccagcttgcc
aatcttagcgccacgctcagccagcaacagcaagcgcaacgcgaccttaatagccagatc
gacgcgcaacgttcccgccgccaatccgtgcaagggcgcttagcctcgctggaaacgttg
caacaatccggcttagaaaaaaccaataaagcacgccaacaatggctcaaagaacacgct
ttggataccgctccccggattgccgaaatcctcaaggttgaagccggttgggaaaccgcg
tttgaagccgtgttgggggaagatttggatgccatctgcctgaagaacccctcaccccta
accccgcacccagccgctttcagcgtcgtccctcaaggggcgaggggaacggatatgttc
cccaacgccggaataacgttactaaacatcgaagcacctcctgccccctcgccccttgag
ggagagagctggggtgaggggtctcttgcccacaaactccacgcgcccgctgctgcccat
agcctcgtcaccggcattcattgcgctgaaaccttgcacgaagccctatctcagcgtcac
acccttgtccccggtgacagcattatcacccgtgacggcgtgtggttaggcataaactgg
ttgcggagtcgccgccaagacgaagccaacggcggtatcttgcaacgccagcaagagatt
gagagcttacgtgaacaactcgaacggctggaaaccgacctcaacgctgggcaaacccgc
gccgacgccgtgcgcaccggcattagcacactcgaacaacagcgccagcaagcccaagcc
gatgtcaaccgctggcaccgcagcgaatccgaactgcgcaaccgcttgcacaccttacaa
cagcgcatcgagcagatcagcaagcgccgccagcaaattgacagcgaatgcgccgaactt
gccacccagcaacagcaacaaagcgccgaacaccaacaagcgaccatccaacgtgacacg
gctttggccttgcttgccaccctgcaaaccgaacgcgatcaactggcggcaacccgtgaa
gactggcagcacgccgtcagcgacgcccgtcgtacccagcgtgacctgcaagccaccatc
caagatgcccgcttacaaatcgaaacccatcgcacccagcgcgacaacagccagcaacaa
ctcgaacgcattcacagccgccttgaattgctggaacaacagcgcgaaaccttgctggaa
caattgcaattacaagacgatccgctcgcagaactggaagaagagcgtgaacaagcgctg
acccaacgcgccgacgtcgagcaacgccttacccacgctcgccagcagttgcaagcgctc
gaagccgagattcgccagcaagacagcgcccgtatccaaaccgaatgccttgccgaaacc
tcgcgcactgccttggaaaaccgcaaactggaatggcaaagcgtgcaagtgcgtgaacaa
actctcgccgaacaatttgctaaaaccgagtttgacgcggcgaatttgcaggctgaattt
ccggcagatgccagcgcggaaacgtttttgcaagccttggacagtgtgcagcgcagtatt
cagcgtttgggtgcaatcaaccttgctgccatcgacgaattccgtgaacaacaagagcgc
aaacactatctggatcaacaaaatgccgatttagtgacggcattagagaccttagaaacc
gctatccgtaaaattgaccgtgaaacccgtgcgcgttttaaggaaaccttcgataaagta
aacagccgtttgggtgaaatgttttcgcgcttgttcggtggcggggaatgttacctggac
atgaccggcgatgacttgctgacaaccggggtggcgattatggcacgcccgccgggtaag
cgaatgtcgaccatttacctgatgtcgggtggcgaaaaagcgttaacggcggtagccttg
gtatttgcgatttttgagctgaatcctgcaccgttttgcctgttggatgaggtggatgcg
ccccttgatgaggcgaatgtcgggcgtttctgtgaactggtcaggcatatgtcagaacag
gtacaattcatattcatcacccacaataaaaccacgatggaacttgccgaaaatcttatc
ggtgttaccatgcgtgaagcgggggtgtcacggttagtcacagtggatatggcggaagct
gtcaaactggcaaatagctaa
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