Thiothrix subterranea: HMY34_19190
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Entry
HMY34_19190 CDS
T07831
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_19190
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
HMY34_19190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_30
AAA_10
TrwB_AAD_bind
Zot
T2SSE
ATPase
Motif
Other DBs
NCBI-ProteinID:
QQZ30707
LinkDB
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Position
complement(3912051..3913571)
Genome browser
AA seq
506 aa
AA seq
DB search
MSQPSGILIGKGEEKVFLNPRFANRHGLIAGATGTGKTISLQVLAEGLSRIGVPVFLADI
KGDLTGISKPGNPHPKVDERVAKIGIDDFRFEGCPTVIWDLSGERGHPVRATISDMGPLL
LAQLLELNDTQEGVLNIAFKVADEQGMLLLDLKDLRAMLQYLGENSKTLSNTYGNVSSAS
IGAIQRQLLVLEQQGADQFFGEPALDLWDFMRTGANGYGNINILAADRLINTPRLYATFL
LWLLSELFENLPEVGDMEKPRLVFFFDEAHLLFNGASKSLVQKVEQVVKLIRSKGVGIYF
ITQTPLDVPESVLGQLGNRVQHALRAFTPRDQKAVRTAAETFRQNPNLDTAETIMQMGVG
EALVSVLDDKGIPTVVQHTLIRPPQSRIGPLTEEERSEILRTSPFAGRYDNLVDRESAYE
LLQKRAVTAATDAAEQEAAAAAQKAERSANSGARRVADREPESDSLLGSIGETFMKNAVK
AATSSAGRRIGTQIVRGLLGSLFKGR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccgagcggaatcctcatcggcaagggcgaagagaaagttttcctgaaccca
cgctttgccaatcgtcacggtctgattgcgggcgctaccggcacggggaaaaccatttcc
ctgcaagtcttggcggaaggattatcccgcattggtgtgccggtgttcctagcggacatc
aaaggcgacctcaccggcattagcaaacccggcaacccgcaccccaaagtggacgagcgc
gtcgctaaaatcggcattgacgatttccgctttgaaggctgccccactgtcatttgggat
ttatcgggtgaacgcgggcatccggtacgcgccaccatttccgacatggggcctttgctg
ctggcacagctcctcgaattgaatgacacccaagagggcgtgttaaacatcgctttcaaa
gtggcggacgaacaaggcatgttgctgctggatctgaaagatttacgcgccatgctgcaa
tacctcggcgaaaacagcaaaaccctcagcaatacttacggcaatgtcagctccgcttcc
atcggcgcgattcaacgccaattgctggtgttggaacagcaaggtgcagaccaattcttc
ggcgaaccagccttggatttgtgggatttcatgcgtactggcgcaaacggttacggcaat
atcaatatcctcgcggcggatcgcctgatcaatacgccacgcttgtacgcgactttcctg
ctgtggttgctgtctgagctgtttgaaaatctgcccgaagtcggcgatatggaaaaaccg
cgcctcgtgttcttctttgacgaagcgcatttgctgttcaatggcgcatccaagtcactg
gtgcaaaaggttgagcaagtcgtcaagctgatccgctccaaaggtgtggggatttacttc
attacccaaacgccactggacgtacccgaatcggtgctgggacaactcggcaatcgcgtg
caacacgcgctgcgggcattcacgccgcgtgaccaaaaagcggtacgcacggctgctgaa
accttccgccaaaacccgaatctcgacaccgccgaaaccattatgcaaatgggcgttggc
gaagcattggtctcggtcttggatgacaagggcattcccaccgtcgtgcaacacaccctt
atccgcccgccgcaatcacggattggcccgctcacggaagaagaacgcagcgagattttg
cgcaccagcccgtttgcggggcgttacgacaatctggtggatcgtgaatcggcttacgaa
ctcttgcaaaaacgtgccgtaacggctgcgacggacgcggctgaacaggaagccgcagcc
gctgcacaaaaagccgaacgcagtgctaacagtggtgcacggcgcgttgccgaccgtgaa
cccgaatccgacagcttattgggcagcatcggcgaaacattcatgaaaaacgccgtgaaa
gcggcaacctccagcgctgggcgacgcattggcacacaaatcgtgcgcggcttactcggt
tcgttgttcaaaggacgctag
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