Thiothrix subterranea: HMY34_19525
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Entry
HMY34_19525 CDS
T07831
Name
(GenBank) PAS domain S-box protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb02020
Two-component system
tsb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMY34_19525
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HMY34_19525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tsb02022
]
HMY34_19525
02035 Bacterial motility proteins [BR:
tsb02035
]
HMY34_19525
Enzymes [BR:
tsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
HMY34_19525
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
HMY34_19525
Two-component system [BR:
tsb02022
]
CheA family
CheA-CheYBV (chemotaxis)
HMY34_19525
Bacterial motility proteins [BR:
tsb02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
HMY34_19525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheR
CheB_methylest
HATPase_c
CheR_N
PAS_4
PAS
PAS_9
HisKA
MAP3K_TRAF_bd
PAS_3
WEMBL
USHBP1_PDZ-bd
DUF745
Fusion_gly
Motif
Other DBs
NCBI-ProteinID:
QQZ30767
LinkDB
All DBs
Position
complement(3980862..3984236)
Genome browser
AA seq
1124 aa
AA seq
DB search
MTTDIDSEQVDKKEDDNRTIIVGIGASAGGLEALRALVPNLPIDERVVYILAQHLDPKHS
SMMVPILARETKLPIAELQHNQPIQTGMFYIIPPAMDAFYANGRFHLEKATGIGPKPSVD
RLFASLAENHGRHTVGIILSGTGTDGTHGIRAIKAEGGITIAQLESTARFDSMPHSAIGT
GHVDLALPPEDIAQQIHDMLAQPDISFLFASKPEPSEDEIQEILRMLLDQTGTDFRDYKR
NTLLRRIERRMTVHKCKQLSEYAAYLKQKPEELYELHNDILISVTSFFRDTDAYQALRRV
VEDIVPEGGHEIRVWVAGCATGEEAYSIAIMLSEYLGNRIARYKIQIFGTDLYDGVLTIA
RQARYSKASVAGIDQRILDKYFIQKDGEYQLTQTIRNMVLFARHDLVRDPPFSHLNLVSC
RNVLIYFNQTLQRNVLESFHYGLEPDGIMFLGKSETIGGSDRLFITVDRKSRIYRRRSDI
KGHLPYLLQNRSLREQRNQQYSNNLRDKPRAKLQDSIDKLLVNIYQPACIMLDDRQEIVY
VRGNVDPYLGFGEGRAALGVLDLIRTELRQDLRGLIYKARRADETITSRRINFTLNGELV
RLVMRIRHFPAGKMTETEVSLVIFEVLPPNDHPIALEQEAISVSDALRIKELEEELREVR
ESLQTTIEELETSNEELQSTYEEAQSTNEELYTSSEELQTSNEELQSTNEELRTVNQEVS
VKSSELEAANLQLKNTNELLLHEIEERKWAEARLEIERAKLDTIFQSQPNWINICALDGT
IQEVNPAGPMIMEAKNPEQLIGHSLKDFVFPEYQADVDTCITQISQTGEFHARELKVKTF
KGNVRWLEIRPVLIHLDNDELRIMSIIVDHTDRMIAQQLLADRQQELAHIMRLNTLGEMA
SGIAHELNQPLSAIANYIRGCELRMKSDECSMKDIADVMQLVGTQVRRAGEILRYAKDFT
RKDQDVEWHEHNINQIIEETLHLLDTTEQFKQVKLSKTLYPNLRLVNVNKIQIEQVLVNM
ILNALDAMEEFSPETIGKLHILSEPVGTYAVRVTVIDEGTGLPEDFASKIFRPFYTSKKS
GMGMGLPISSSIIEAHGGKLEATNNATKGATFSFTLPLTGTNRK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgatattgatagcgaacaagtcgataaaaaagaagatgacaatcgcaccatt
atcgttggtattggcgcatcagcaggcggcttagaggcattaagagccttagttcccaac
ctccctattgatgaacgtgtcgtttacattttggcacaacacctagatcccaagcacagc
agcatgatggtgcccattctggcacgcgaaaccaaattgccgattgcggagttacaacac
aatcaacccatccaaaccggaatgttctacattattccgccagcgatggatgctttttat
gccaatggacggtttcatttggaaaaagccaccggcattggccccaaaccttccgttgat
cgcttgtttgcctcattagcagaaaatcatggcagacacaccgtaggcattatcctttct
ggtacgggcacagatggcacacacggtatccgcgccatcaaagccgagggcggtatcacc
attgcgcaactcgaatccaccgcccgttttgacagtatgccgcattccgctatcggtacg
gggcatgttgatcttgccctgccccctgaagatattgcccaacaaattcacgacatgctg
gcgcaaccggatatttcatttttatttgccagcaaacctgaacccagtgaagatgagatt
caggaaatattgaggatgttactcgatcaaaccggcacggattttcgcgattacaaacgc
aataccttgctgcgccgtatcgaacgccgcatgacggtacacaaatgcaagcaactgagt
gaatacgctgcttatttgaagcaaaaacccgaagaattgtatgagttacacaatgatatt
ctgatttcagtcacgagcttttttcgggatacggacgcttatcaagccctgcggcgcgta
gtagaagatattgtccctgaaggtggacacgaaattcgggtatgggtggcaggttgtgcc
acgggtgaagaggcttattccatcgcaattatgttgtctgaatacctcggcaaccgcatt
gcgcgttataaaatacaaatttttggtactgatttgtatgatggtgttttgaccattgcg
cggcaggcacggtattccaaagcttcagtcgcgggaattgatcaacgcattctcgataaa
tacttcatccaaaaagacggcgaataccaactgacgcaaaccatccgtaatatggtattg
tttgcgcgtcatgatttagttcgcgacccgcccttttcacacttgaacttggtttcatgc
cgcaatgtattgatttactttaatcagaccttgcaacgcaatgtattagaatctttccat
tacggtttagaaccggatggcattatgtttctcggtaaatcggaaaccattggcggcagt
gatcgtttatttattacggtggatcgtaaatcgcgtatttaccgccgtcgtagcgatatt
aaaggacacttgccttatttattgcaaaatcgctcactccgcgaacaacgcaaccaacaa
tacagcaataatcttcgcgacaaaccccgtgctaaattacaagattccatcgacaagcta
ttggttaatatttaccaacccgcctgcattatgttggatgaccgtcaagaaattgtgtat
gtgcgcggcaatgttgacccctaccttggttttggggaaggtcgtgcagcgttaggtgtg
ctcgatttaattcgcactgaattacgccaagacttacgtggattaatttacaaagcacgg
cgtgctgatgaaacgattaccagtcgccgcattaatttcaccctcaatggtgaactggtg
cgcttggtgatgcgtatccgtcactttccagcgggtaaaatgactgaaacagaagttagc
ctcgttatttttgaagtcttgcccccgaacgatcaccccatcgcgttagaacaagaagct
attagcgtcagcgatgctttgcgtatcaaagagttagaagaagaattgcgtgaagttcgt
gaaagtttgcaaaccacaatcgaagaattagaaacgtccaacgaagagctgcaatctact
tacgaagaagcccaatccactaacgaagaactctacacctctagcgaagaattgcagaca
tctaatgaagaattgcaatccaccaatgaagaattacgcacggttaaccaagaagttagc
gtcaaaagtagcgagttagaagcggctaatttacaactgaaaaataccaacgaattgttg
ctccacgaaattgaagaacgcaagtgggcggaagctcgtctggaaatcgaacgcgctaag
ctggataccattttccaaagccaaccgaactggattaatatctgcgcattggatggcacg
attcaagaggtgaatcccgcaggaccaatgattatggaggcaaaaaatccagagcagttg
attggacactcgctcaaagattttgtgtttcctgaataccaagccgatgtcgatacgtgt
atcactcagattagccagacaggtgagtttcatgcacgcgaacttaaagtcaaaaccttt
aaaggcaatgttcgctggctggaaatacgtccggtattgattcatctggacaatgatgaa
ttgcgcattatgtcaataattgttgaccacactgaccgcatgattgctcaacaattgctg
gcagaccgccaacaagaacttgcacacattatgcgtttaaataccttgggtgaaatggca
tcgggcattgcgcatgaactcaatcagccattgtccgcgattgccaattatattcgtggc
tgtgaattacgcatgaaaagcgacgaatgcagcatgaaagatattgcggatgtgatgcaa
ttggtcggtactcaagtgcggcgagcaggcgaaattttacgttatgccaaagactttacc
cgcaaagatcaggatgtcgaatggcacgagcataatattaaccagattattgaggaaact
ttgcacctactggatacaacggaacaatttaaacaagttaaattaagcaaaacgctttat
cccaacttacggttggtgaatgttaataaaatccagattgaacaagtattggtgaatatg
attctaaatgcattggatgcaatggaagaattttcacctgaaaccatcggcaaactgcat
attctcagcgaacctgtcggcacatacgcagtacgagtgacggtgattgatgaaggcacg
ggcctgcctgaagattttgccagtaagattttccgacccttctataccagcaagaaaagt
ggaatgggcatgggattaccaatcagcagttccatcattgaggcgcatggtggtaagctt
gaggctaccaataatgctaccaaaggcgctacctttagtttcactttaccgttgacagga
actaaccgtaaatga
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