Thiothrix subterranea: HMY34_19600
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Entry
HMY34_19600 CDS
T07831
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_19600
Transporters [BR:
tsb02000
]
Other transporters
Pores ion channels [TC:
1
]
HMY34_19600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QQZ30780
LinkDB
All DBs
Position
complement(4004952..4005617)
Genome browser
AA seq
221 aa
AA seq
DB search
MNKSILIAAAIAAFCSSPVFAGGSLFGGDSSDEDSTGAIYGGASIGQSSDGSCDALKDQV
GALLNDVECPTPSAWKVFGGYQIAPNLAVEGAYVDFGEAAADGAIPAVLGLNKIANPASL
TSQATGFNVAGVASTPVTEEVSVFGKAGLMMWEKESAATIENFGPSATTITQKTTTDGVD
LSLGAGAEYKIDDNWGVRGELEHFNGLNNNLYSVGATFSTF
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatccattctaatagcagcggctatcgctgctttttgcagttctcctgtgttt
gctggcggttccttgttcggtggcgactcttctgatgaagatagtactggcgctatttat
ggtggtgcgagtattggtcaatccagcgatggttcctgcgacgctcttaaagatcaagtg
ggcgcactgctaaatgacgttgaatgccctactcctagcgcttggaaagtttttggcggc
tatcaaattgcccccaatttagcggttgagggcgcttacgttgatttcggcgaagctgct
gctgatggtgctatacctgctgttctgggtctcaacaagattgccaatcccgctagtctt
acctcacaagcaacaggcttcaatgtagccggtgtagccagtacgccagtcacggaggag
gttagcgtgttcggtaaagccggtttaatgatgtgggaaaaagaaagcgccgctactatt
gaaaattttggcccaagtgcaaccactattactcaaaaaacgacaactgacggtgttgat
ttgtctttgggtgctggtgctgagtataaaattgatgacaactggggggtgcgaggtgaa
cttgagcatttcaatggtttaaacaacaacctttactctgttggcgcgaccttctcgacg
ttttaa
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