Thermus scotoductus: TSC_c00790
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Entry
TSC_c00790 CDS
T01414
Symbol
dnaE
Name
(GenBank) DNA polymerase III, subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03030
DNA replication
tsc03430
Mismatch repair
tsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TSC_c00790 (dnaE)
03430 Mismatch repair
TSC_c00790 (dnaE)
03440 Homologous recombination
TSC_c00790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsc03032
]
TSC_c00790 (dnaE)
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c00790 (dnaE)
Enzymes [BR:
tsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TSC_c00790 (dnaE)
DNA replication proteins [BR:
tsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TSC_c00790 (dnaE)
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TSC_c00790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Intein_splicing
LAGLIDADG_3
tRNA_anti-codon
T2SSK
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
ADW20732
UniProt:
E8PJF2
LinkDB
All DBs
Position
60917..65857
Genome browser
AA seq
1646 aa
AA seq
DB search
MGRLKFAHLHQHTQFSLLDGAAKLSDLLEWVKTVSPEDPALAMTDHGNLFGAVEFYKKAT
AMGIKPIIGYEAYVAAESRFDRKRGKGLDGGYFHLTLLARDFKGYQNLVRLASRAYLEGF
YEKPRIDREILREHAEGLIALSGCLGAEIPQFILQDRLDLAEARLNEYLSIFGDRFFIEI
QNHGLPEQRKVNQVLREFARKYGLGMVATNDGHYVRKEDARAHEVLLAIQSKSTLDDPER
WRFPCDEFYVKTPEEMRAMLPEEEWGDEPFDNTVEIARMCEVDLPIGDKMVYRIPRFPLP
EGRTEAQYLRELTFKGLLSRYPDRITEGFYREVFRLLGKIPPHGDGEALAEALAQVEGKA
WEALLPKLPPLEGVREWTAEAILHRALYELSVIERMGFPGYFLIVQDYINWARRNGISVG
PGRGSAAGSLVAYAVGITNIDPLRFGLLFERFLNPERVSMPDIDTDFSDRERDRVIQYVR
GRYGEEKVAQIGTFGSLASKAALKDVARVYGIPHKKAEELAKLIPVQFGKPKPLAEAIEL
VPELRAEMEKDPRVREVIEVAMRLEGLNRHASVHAAGVVIAAEPLTDLVPLMRDQEGRPV
TQYDMGAVEALGLLKMDFLGLRTLTFLDEAKKIVKESKGVELDYDRLPLDDPKTFALLAR
GETKGVFQLESGGMTATVRGLKPRRLEDIIALVSLYRPGPMEHIPTYIRRHHGQEPVSYV
EFPHAERYLRPILEETYGIPVYQEQIMQIASQVAGYSLGEADLLRRAMGKKKVEEMQKHR
ERFVRGARERGVPEEEANRLFDMLEAFANYGFNKCLPGRARVLDYRTGKLVPIEAIVRGE
AKGVWVVSLDESTLRLVPRPVVAAFQSGRAMVYRLRTATGRVLEATANHPLYTPEGWREL
GTLRPGDFVALPRHLPYQPSEDLKPHELDLLGFALSEGNLRHPSGFYLYTSSEEELAAME
EALAGFANTRTRVVWRRGVAHIYVGRRDRKLPSEAETFLREMGLLGLAAKDKHLPERVFG
LSQEGVARLLGRLWVGDGGVDAKGRLIHYATASEALARGVQHLLLRLGLQSRLVEKRFLY
KGGRKGYVVYLLGGLEAARRFGELVGPYLLGKRKRDLEALLSSWEEVGRSTKDILPLAFL
PLVRDALAQASGGGVGDFLEAHGLAQGLLRPSKGRLGLSRATLARLSALTGSLALLRLAT
AEIYWDRVEAIEPLWEEEVYDLTVEGTHTFLAEDVIVHNSHAAAYSLLSYQTAYVKAHYP
VEFMAALLTVERHDSDKVAEYIRDARAMGIEVLPPDINRSGFDFKVVGEEILFGLSAVKN
VGEGAAQAILAERERRGPFKSLGDFLKRLDEKVVNKRTLESLIKAGAFDAFGDRARLLAS
LDPLLRWAAESRERERSGMMGLFAEVEEPPLAEALPLDEITRLRYEKEALGIYVSGHPVL
RYPGLREVASCTLEELPDFIRGLPPRPRVLLAGMVEEVARKPTRSGGMMARFTLSDETGA
LEVVVFGRAYEGVSPKLKEDTPLLVLAEVEREEGGLRVMAQAAWTHEEVAEAPKALEVEV
DHALLDEAGVALLKSLLDEYPGTLPLYLRVQGPFGEAILSLRETRVGEGALEALETEGFR
AYLIPDREAFLQGNGGGGPKEEVVPF
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccttaagttcgcccacctgcaccagcacacccagttctccctcctggacggg
gcggcgaagctttctgaccttcttgagtgggtgaaaacggtttcccccgaggaccctgcc
ctggccatgaccgaccacggcaacctcttcggggcggtggagttctacaagaaggccacc
gccatggggatcaagcccatcatcggctacgaggcttacgtggccgcggaaagccgcttt
gaccgcaaaagggggaagggcctggacggggggtacttccacctcacccttcttgccagg
gacttcaagggctaccagaacctggtgcgcctggcgagccgggcatacctggagggtttt
tacgaaaaaccccgcattgaccgggagattctacgggagcatgccgagggtcttatcgcc
ctttcggggtgcctgggggcggagattccccagttcatcctgcaggaccgcctggacctg
gcggaggcccggctgaacgagtacctctccatcttcggcgaccgctttttcatagagatc
cagaaccacggcctgcccgagcaaaggaaggttaaccaggtcctgagggagttcgcccgg
aagtacggcctggggatggtggccaccaacgacggccactacgtgcgcaaggaggacgcc
cgggcccacgaggtgcttctcgccatccagtccaagagcaccctggatgaccccgagcgc
tggcgtttcccctgcgacgagttttacgtgaagaccccagaggagatgcgggccatgctc
ccggaggaggagtggggcgacgaaccctttgacaacacggtggagatcgcccgcatgtgc
gaggtggaccttcccatcggggacaagatggtctaccgcatccctcgctttccccttccc
gagggaaggaccgaggcccagtaccttagggagctcaccttcaaagggcttctttcccgg
tatccggaccgcatcaccgaggggttttaccgggaggtcttccgccttctggggaagata
ccgccccatggggacggggaagccctggcggaggccttggcccaggtggaagggaaggct
tgggaagcccttctgcccaagctacccccgttggagggggtgagggagtggacggcggag
gccatcttgcaccgggccctttacgagctttccgtgatcgagcggatgggctttcccggc
tacttcctcatcgtccaggactacatcaactgggccaggcggaacgggatctccgtggga
ccaggccggggaagcgccgccgggagcctggtagcctatgccgtgggcatcaccaacatc
gaccccctgcgcttcggcctcctctttgagcgcttcctgaaccccgagcgggtttccatg
cccgacatcgacacggacttttccgaccgggagcgggaccgggtgatccagtacgtgcgc
gggcgctacggggaggagaaggtggcccagatcggcaccttcggtagcctggcctccaag
gcagccctcaaggatgtggcccgggtctacggcatcccccacaagaaggcggaggagctg
gccaagctgattcccgtgcagttcggcaagcccaagcccctggccgaggccatagagctg
gtgccggagttaagggcggagatggaaaaagacccccgggtgcgggaggtgatcgaggtg
gccatgcgcctcgagggcctgaaccgccatgcttccgtgcacgccgccggggtggtgatc
gccgccgagcccctcacggacctggtgcccctcatgcgggaccaggagggacggcccgtg
acccagtacgacatgggggcggtggaggccctggggcttttgaagatggacttcctgggc
ttgcgcaccctcaccttcctggacgaggccaagaagatcgtgaaggagtccaagggggtg
gagctggactatgatcgcttgcccttggacgaccccaagaccttcgccctcttggcgcgg
ggggagaccaagggggttttccagctggaatcgggagggatgaccgccacggtgcggggg
ctaaagcccaggcgcctcgaggacatcatcgccctggtttccctctaccgcccggggccc
atggagcacatccccacctacatccgccgccaccatggccaggagcccgtgagctacgtg
gaattcccccatgcggagaggtacctgaggcccatcctggaggaaacctacggcatcccc
gtctaccaggagcagatcatgcagatcgcctcccaggtggcgggctactccctaggggag
gccgaccttttgaggcgggccatgggcaagaagaaggtggaggagatgcaaaagcaccgg
gagcgcttcgtgcggggggccagggagcggggcgtgcccgaggaggaggccaaccggctt
tttgacatgctggaggccttcgccaactacggcttcaacaagtgcctgccgggaagggcc
cgggtgctggactaccgtacgggaaagcttgtgcccatagaggccatcgtccggggggaa
gccaaaggggtctgggtggtttccctggacgagagcaccctgcgtctggtgccgaggccg
gtggtggccgccttccaaagcggccgggccatggtctaccgtttgcgcaccgccacggga
cgggtcctcgaggccacggccaaccaccccctctacaccccagagggttggcgggagttg
ggcacccttcgcccaggggacttcgtggccctgcccaggcaccttccctaccagccttca
gaggacctgaagccccatgagctggaccttctgggcttcgcccttagcgagggaaacctc
cgacatccctccggcttttacctctacacctcctcggaggaagagctggccgctatggag
gaggccctggcgggctttgccaacacccgcacccgggtggtctggcgccggggggtagcc
catatctacgtgggccggcgggaccgcaagcttccctcggaggcggaaaccttcttgagg
gagatggggcttttggggcttgccgccaaggacaagcatcttcccgaaagggtctttggc
ctttcccaggaaggggtggcccggcttcttgggcgcctgtgggtgggggatgggggagtg
gacgccaagggtaggctcatccattacgccacggcctccgaggcccttgcccgcggggtc
cagcacctcctcctccgcctgggcttgcaaagccgcctggtggagaagcgctttctctat
aaagggggccggaaaggatatgtggtctacctcctggggggcctcgaggcggcccggcgc
tttggggagctggtggggccttaccttctcggcaagaggaagcgggacctggaggccctt
ctttcctcctgggaggaggtgggccggagcaccaaggacatcctgcctctggcctttctc
cccctggtaagggatgctttggcccaggcttccgggggtggggtgggggattttctggag
gcccatggcttagcccagggtcttttgcggcccagcaagggccgcctggggctttcccgc
gccaccctggcgcgcctttcggccctcacgggaagcctggccctgttgcgcctggccacg
gcggagatctattgggaccgggtggaggccatagagcctctttgggaggaggaggtctac
gacctcaccgtggagggaacccataccttcctggccgaggatgtgatcgtccacaactcc
cacgccgccgcctacagcctcctttcctaccagaccgcctacgtgaaggcccactacccg
gtggagttcatggccgccctcctcaccgtggagcggcacgattccgacaaggtggcggag
tacatccgcgacgcccgggccatgggcatagaggtccttccccccgacatcaaccgctcg
ggctttgacttcaaggtggtgggggaggagatcctctttggcctctccgcggtgaagaac
gtgggggaaggggcagcccaggccatcctggcggaaagggagcgccgaggtccctttaag
agcctcggggacttcctcaagcgcctggacgagaaggtggtgaacaagcgcaccctggag
tccctcatcaaggcgggggcctttgacgcctttggggacagggcccggttgctggcttcc
ttggaccccctcctccggtgggcggcggaaagccgggagcgggagcgatccggcatgatg
ggcctgttcgccgaggtggaagaacctcccctggcggaagccttgcccctggacgagatc
acccggcttcgctacgagaaggaggccttgggcatctacgtttccggccacccggtgctg
cgctacccgggcctgagggaggtggcgagttgcaccctggaggagcttcccgacttcatc
cggggccttcccccaaggcccagggtgctcctcgcgggcatggtggaggaggtggcgcgc
aagcccacccgcagcgggggcatgatggcccgttttaccctctccgacgagacaggggcc
ctcgaggtggtggttttcggccgggcttacgagggggtttctcccaagctcaaggaggac
acccctctcctggtcctggcggaggtggagcgggaggaaggggggcttagggtcatggcc
caggctgcctggacccacgaggaggtggccgaggcccccaaggccctggaggtggaggtg
gaccacgccctgttggacgaggcgggcgtggcccttctcaagagcctcttggacgaatac
cctggcaccctccccctttacctcagggtgcaggggcctttcggtgaggccatcctttcc
ttgcgggaaacccgggtgggggaaggggcgctggaggctctcgagaccgagggcttccgc
gcctatctgatcccggatcgggaggccttcctccaggggaacggtggaggagggcccaaa
gaggaagtggtgcccttttag
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