Thermus scotoductus: TSC_c00810
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Entry
TSC_c00810 CDS
T01414
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TSC_c00810 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsc03019
]
TSC_c00810 (groL)
03110 Chaperones and folding catalysts [BR:
tsc03110
]
TSC_c00810 (groL)
03029 Mitochondrial biogenesis [BR:
tsc03029
]
TSC_c00810 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsc04147
]
TSC_c00810 (groL)
Enzymes [BR:
tsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TSC_c00810 (groL)
Messenger RNA biogenesis [BR:
tsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TSC_c00810 (groL)
Chaperones and folding catalysts [BR:
tsc03110
]
Heat shock proteins
HSP60 / Chaperonin
TSC_c00810 (groL)
Mitochondrial biogenesis [BR:
tsc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TSC_c00810 (groL)
Exosome [BR:
tsc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TSC_c00810 (groL)
Exosomal proteins of other body fluids (saliva and urine)
TSC_c00810 (groL)
Exosomal proteins of breast cancer cells
TSC_c00810 (groL)
Exosomal proteins of colorectal cancer cells
TSC_c00810 (groL)
Exosomal proteins of bladder cancer cells
TSC_c00810 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ATP-synt_Eps
Motif
Other DBs
NCBI-ProteinID:
ADW20734
UniProt:
E8PJF4
LinkDB
All DBs
Position
complement(66508..68136)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILVFDEAARRALERGVNAVADAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEIE
LENHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIE
KAVEAAVEKIRSLAIPVEDRKAIEEVATISANDPDVGKLIADAMEKVGKEGIITVEESKS
LETELKFVEGYQFDKGYISPYFITNPDAMEAVLEDAFILIVEKKVSNVRELLPILEQVAQ
TGKPLLLIAEDVEGEALATLVVNKLRGTLNVAAVKAPGFGDRRKEMLKDIAAVTGGTVIS
EELGFKLENATLSMLGRAERVKITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAK
EKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVALLRA
ISAVDELLKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVVVQRILSETKNLRLGFN
AATGEYVDMVEAGIVDPAKVTRSALQNAASIGSLILTTEAVVAEKPEKKESTPAPTGGDM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctggtgtttgacgaagcggcccgccgggccttggagcgcggcgtgaac
gcggtagccgatgcggtgaaggtaaccctgggcccccggggccggaacgtggtcctggag
aagaagttcggctcccccaccatcaccaaggacggggtgacggtggccaaggagatcgag
ctggagaaccacctggagaacatcggggcccagctcctcaaggaggtggcctccaagacc
aacgacgtggccggtgacggtaccaccaccgccaccgtcttggcccaggccatcgtgcgg
gagggcctgaagaacgtggccgccggcgccaaccccctggccctcaagcggggcatcgag
aaggcggtggaggcggcggtggagaagatccgctccctggccatccccgtggaggaccgc
aaggccatcgaggaggtggccaccatctccgccaacgaccctgacgtgggcaagctgatc
gccgacgccatggagaaggtggggaaggaggggatcatcaccgtcgaggagtccaagagc
ctggagaccgagctgaagttcgtggaggggtaccagtttgacaaggggtacatctccccc
tacttcatcaccaaccccgacgccatggaggcggtcctcgaggacgccttcatcctcatc
gtggagaagaaggtctccaacgtgcgcgaactcctccccatcctggagcaggtggcccag
acgggtaagcccctcctcctgatcgccgaggacgtggagggcgaggccctggccaccctg
gtggtcaacaagctccggggcaccctgaacgtggctgcggtgaaggctcccggcttcggt
gaccgccgcaaggagatgctcaaggacatcgccgccgtcaccggtggtaccgtcatctcc
gaggagcttggcttcaagctggagaacgccaccctctccatgctgggccgggccgagcgg
gtgaagatcaccaaggacgagaccaccattgtgggcggcaagggcaagaaggaggacatc
gaggcccgcatcaacggcatcaagaaggagctggagaccacggacagcgagtacgccaag
gagaagctccaggagcgcctggccaagctggcggggggcgtggcggtgatccgggtgggg
gccgccaccgaaaccgagctcaaggagaagaagcaccgctttgaggacgccctgaacgcc
acccgggccgcggtggaagagggcatcgtcccgggcggtggcgtggcgctcctcagggcc
atcagcgccgtggacgagctccttaagaagctggagggggacgaggccaccggggccaag
atcgtgcgtcgggccttggaggagcctgcccgtcagatcgccgagaacgccggctacgag
ggctccgtggtggtccagaggatcctctccgagaccaagaacctccgcctgggcttcaac
gccgccaccggggagtacgtggacatggtggaggcaggcatcgtggaccccgccaaggta
acccgctccgccctgcagaacgccgcctccatcggctccctcatcctcaccaccgaggcg
gtggtggccgagaaacccgagaagaaggagtccacccccgctcccacgggcggcgacatg
gacttctaa
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