| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase, subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tsc00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TSC_c04240 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tsc03021]
TSC_c04240 (rpoC)
03400 DNA repair and recombination proteins [BR:tsc03400]
TSC_c04240 (rpoC)
Enzymes [BR:tsc01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TSC_c04240 (rpoC)
Transcription machinery [BR:tsc03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TSC_c04240 (rpoC)
DNA repair and recombination proteins [BR:tsc03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TSC_c04240 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
368004..372596
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| AA seq |
1530 aa
MPLSGGGMKKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPT
KDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIG
TLLDLSATELEQVLYFSKYIVLDPKGAVLDGVPVQKRQLLTDEEYRELRYGKQETYPLPQ
GVDALVKDGEEVVKGQELAPGVVSRMDGVALYRFPRRVRIDYLRKERAGLRLPLSAWVER
EGYRPGEILAELPEPYLFRSEEEGVVELKELEEGHLLTLLKDEEAVARYFLPVGLTPLVV
HGEVVEKGQPLAEGRGLLRMPRHMTAKEVEAEEEGDTVYLTFFLEWTEPKDYGVAPHMNV
VVPEGAHVQAGEKVVAAIDPEEEVIAEAEGIVHLHEPASIVVMKARLYPFEDDVEVTTGD
RVAPGDVLADGGKVKSEIYGRVEVDLVRNVVRVVESYDIDARMGAEAIQALLKELDLEKL
EAELLEEMKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGG
RFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDAVIDNGRRGSPVTN
PGSERPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELF
KPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGI
QAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPA
SGEPLAKPSRDIILGLYYITQVRREKKGAGREFATPEEALAAYDRGEVALNAPIKVAGKE
TSVGRLKFVFTSPDEALLAVAHGLLDLQDVVTVRYLGKRLETSPGRVLFARIVGEAVGDE
KVAQELLQMDVPQEKNSLKDLVYQSFLRLGIEKTARLLDALKYYGFTLSTTSGITIGIDD
AVIPPEKQKYLEEADKKLRQIEQAYEMGFLTDRERYDQVIQLWTETTEKVTRAVFKNFEE
NYPFNPLYVMAQSGARGNPQQIRQLCGMRGLMQKPSGETFEVPVRSSFREGLTVLEYFIS
SHGARKGGADTALRTADSGYLTRKLVDVAHEIVVREADCGTTNFISVPLFQPDEVTRTLR
LRKRSDIESGLYGRVLAREVEVLGQRLEEGRYLTLEDVGLIIKAAEAEEIKEVPVRSPLT
CQTRYGVCQKCYGYDLSMARPVSIGEAVGVVAAESIGEPGTQLTMRTFHTGGVAVGTDIT
QGLPRVIELFEARRPKAKAVISEIDGVVRIEETEEKLSVFVESEGFSKEYKLPKDARLVV
KDGDYVEAGQPLTRGAVDPHQLLEAKGPEAVERYLVDEIQKVYRAQGVKLHDKHIEIVVR
QMLKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKS
WLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGNDFVRFTQVVDKKTLK
AIEEARKEAVEAKEPAVRRPVRREQPGKQA |
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| NT seq |
4593 nt +upstreamnt +downstreamnt
ttgcccttaagtggaggaggaatgaaaaaggaagttcgcaaggttcgcatcgccctggcc
tctccggaaaagatccgctcctggagctacggggaggtggagaagcccgaaaccatcaac
taccgcaccctgaagcccgagcgggatgggcttttcgacgagcgcatcttcggccccacc
aaggactacgagtgcgcctgcggcaagtacaagcgccagcgctttgagggcaaggtgtgc
gagcgctgcggggtggaggtcaccaagagcatcgtgcgccgctaccgcatggggcacatc
gagctggccaccccggcggcccacatctggttcgtgaaggatgtgccctccaagatcggc
accctcctggacctctccgccaccgagctggagcaggtcctgtacttcagcaagtacatc
gtcctggaccccaagggggcggtgctggatggggtgccggtgcagaagcgccagctcctc
acggacgaggagtaccgggagctccgctacggcaagcaggaaacttaccccctgccccaa
ggggtggatgccctggtcaaggacggggaggaggtggtgaaggggcaggagctggccccc
ggggtggtgagccgcatggatggggtggccctgtaccgcttcccccggcgggtgcggatc
gactacctgcgcaaggaacgggcgggcctccgcctgcccctctccgcctgggtggagagg
gagggctataggccgggagagatcctggcggaactccccgagccctacctcttccggtcg
gaggaggagggggtggtggagcttaaggagctcgaggagggccacctcctcaccctcctc
aaggacgaggaggccgtggcccgctacttcctgcccgtggggttgacccccttggtggtc
cacggggaggtggtggaaaagggccagcccctggccgaggggcggggtcttttgcgcatg
ccccgccacatgaccgctaaggaggtggaggcggaggaggaaggggataccgtctacctc
accttcttcctggagtggacggagcccaaggactatggggtggctccccacatgaacgtg
gtggtgccggaaggagcccacgtccaggcgggggagaaggtggtggcggccattgacccc
gaggaggaggtgatcgccgaggccgagggcatcgtccacctgcacgagcccgccagcatc
gtggtgatgaaggcccgcctctacccctttgaggacgatgtggaggtgaccaccggggac
cgggtggccccgggggatgtcctggcggatggggggaaggtcaagagcgagatctacggc
cgggtggaggtggacctggtccggaacgtggtgcgggtggtggagtcctacgacatcgac
gcccgcatgggggccgaggccatccaggccctcttgaaggagctggacctggagaagctg
gaggccgagctcttggaggagatgaagcacccctcccgggcccggcgggccaaggccagg
aagcgcctcgaggtggtccgggccttcctggactccggcaaccgcccggagtggatgatc
ctcgaggcggtgcccgtgcttcccccggacctccgtcccatggtccaggtggacgggggg
cgcttcgccaccagcgacctcaacgacctctaccgccgcctcatcaaccgcaacaaccgc
ctgaagaagcttctggcccagggagccccggagatcatcatccgcaacgagaagcgcatg
ctgcaggaggcggtggatgcggtcatcgacaacggccgccgcggctcccccgtcaccaac
ccgggctccgaacggcctcttaggagcctcaccgacatcctctccggcaagcagggccgc
ttccgccagaacctcttgggcaagcgggtggactactcggggcggagcgtgatcgtggtg
ggtccccagctcaagctccaccagtgcggcctgcccaagcgcatggccctggagctcttc
aagcccttcctcctcaagaagatggaggaaaagggcattgcccccaacgtgaaagcggcc
cgtaggatgctggaaaggcagcgggacatcaaggacgaggtgtgggacgccctcgaggag
gtcatccacggcaaggtggtcctcttaaaccgcgcccccaccctccaccgcctgggcatc
caggccttccagccggttttggtggaaggccagtccatccagctccaccccctggtctgc
gaggccttcaacgccgacttcgacggggaccagatggcggtgcacgtgcccctctcctcc
ttcgcccaggcggaggcccgcatccagatgctctccgcccacaacctcctctccccggcc
tccggagagcctttggccaagcccagccgggacatcatcctggggctttactacatcacc
caggtgcgccgggagaagaagggggcgggccgggagttcgccacccccgaggaggccctg
gccgcctacgaccggggcgaggtggccttgaacgctcccatcaaggtggcaggcaaggaa
accagcgtgggccgcttgaagttcgtcttcacaagccctgacgaggcccttttggcggtg
gcccatggccttctggacctgcaggacgtggtgacggtccgctacctgggcaagcggctg
gaaaccagcccgggccgggtgctctttgcccgcatcgtgggcgaggcggtgggggatgag
aaggtggcccaggagcttctgcagatggacgtgccccaggagaagaactccttgaaggac
ctggtctaccagtccttcctgcgcctggggatcgagaagaccgcaaggcttctggacgcc
ctcaagtactacggcttcaccctgtccaccaccagcgggatcaccatcggcatcgacgac
gccgtcatcccccccgagaagcagaagtacctggaggaagccgacaagaagcttcggcag
attgagcaggcctacgagatgggcttcctcaccgaccgggagcgctacgaccaggtgatc
cagctctggaccgaaaccacggagaaggtcacccgggcggtcttcaagaactttgaggag
aactaccccttcaaccccctctacgtgatggcccagtccggggcccggggtaacccccag
cagatccgccagctttgcggcatgcgggggctgatgcaaaagccctcgggggagaccttt
gaggtgcccgtgcgctcctccttccgcgaggggcttaccgttttggagtacttcatcagt
agccacggggcccgtaagggcggggcggacacggcgctccgcaccgccgactccggctac
cttacccggaagctcgtggacgtggcccacgagatcgtggtgcgggaggcggactgcggc
accaccaacttcatctccgtccccctcttccagcccgacgaggtgacccgcaccctgcgc
ctcaggaagcgctcggacatcgagtccggcctctatggccgcgttctggcccgggaggtg
gaggttctgggccagcgcctggaggaagggcgctacctgaccctcgaggacgtggggctc
atcatcaaggcggcggaggccgaggagatcaaggaggtgcccgtgcgtagccccctcacc
tgccagacccgctacggggtgtgccagaagtgctacggctacgacctctccatggccagg
cccgtgtccatcggggaagcggtgggggtggtggcggcggagtccatcggcgagcccggc
acccagctcaccatgcgcaccttccacacgggcggcgtggcggtgggcaccgacatcacc
cagggtctgccccgggtcatcgagctctttgaggcccgcaggcccaaggctaaggcggtg
atctccgagatcgacggggtggtgcgcatcgaggaaaccgaggagaagctttccgtcttc
gtggaatccgagggcttctccaaggagtacaagcttcccaaggatgcccgcttggtggtg
aaggatggggattacgtggaggcgggccagcctttgacccgcggggccgtggatccccac
cagcttctggaggccaagggccccgaggcggtggagcgctacctggtggacgagatccag
aaggtctaccgggcccagggggtgaagctccacgacaagcacatcgagatcgtggtgcgg
cagatgctcaagtacgtggaggtcaccgatcccggggatagccgcctgctggagggccag
gtcctggagaagtgggacgtggaggccctgaacgagcggctcatcgccgagggcaagacc
ccggtggcctggaagcccctcctcatgggggtcaccaagagcgccctctccaccaagagc
tggctttccgccgccagcttccagaacaccacccatgtgctcaccgaggcggccatcgcc
ggcaagaaggacgagctcatcggtctcaaggaaaacgtcatcttgggccgcctgatccct
gcggggaccggaaacgacttcgtgcgctttacccaggtggtggacaagaagaccctcaag
gccatcgaggaagccaggaaggaggcggtggaggccaaggagccggcggtgcgccgtccg
gttcgccgggaacagccgggcaagcaggcttaa |
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