Thermus scotoductus: TSC_c04610
Help
Entry
TSC_c04610 CDS
T01414
Name
(GenBank) geranylgeranyl diphosphate synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tsc
Thermus scotoductus
Pathway
tsc00900
Terpenoid backbone biosynthesis
tsc01100
Metabolic pathways
tsc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TSC_c04610
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tsc01006
]
TSC_c04610
Enzymes [BR:
tsc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TSC_c04610
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TSC_c04610
2.5.1.29 geranylgeranyl diphosphate synthase
TSC_c04610
Prenyltransferases [BR:
tsc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TSC_c04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ADW21097
UniProt:
E8PLD3
LinkDB
All DBs
Position
complement(404798..405790)
Genome browser
AA seq
330 aa
AA seq
DB search
MAPSPQEVKDALHERLLGHLTHPDPAYQALLQEYPSRGGKMLRGLLVVYAGLAHGATLEA
SLWAGTALELFQNWVLIHDDIEDGSEERRGRPALHRLYPMPLALNAGDALHGEMWGLLIR
GLNEGLFGPEVLAEFHQVVHRTAYGQHLDLLWTLSGRLDLAPEDYLHMVAHKAAYYTAVA
PLRLGALLSGKTPPALYEEAGLKLGIAFQIMDDVLNLEGDQAYGKELAGDLYEGKRTLIL
IRYLQEAPKEDRTRAEALLSLPREAKPEAEVRWLWQNLLVSGAVAWAKEEARRLAQEGMG
ALISYLDTLPGREAASHLQNLLTALVERRA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctctccccaggaagtgaaggatgccctccacgaaaggctcctgggccacctg
acccaccccgatcccgcttaccaggcgcttcttcaggagtatccatcccgaggtggaaag
atgctccgggggcttttggtggtctatgcggggctggcccatggtgctaccctcgaggcc
agcctttgggcaggaactgccctggaacttttccaaaactgggtgctcatccacgacgac
atcgaagatggctccgaggagcgccggggaaggcccgccctgcaccgcctctaccccatg
cccctggccttgaatgccggggatgccctgcacggggagatgtgggggcttttgatccgg
ggcttgaacgaaggcctctttggaccggaggtgctggccgagttccatcaggtggtgcac
cgcactgcctacgggcaacacctggacctcctctggaccctttccggccgcctggacctg
gccccggaggattacctccacatggtggcccacaaggccgcctactacaccgccgtggct
cccttgaggcttggagccctgctttccgggaaaacaccccctgccctctacgaggaagca
gggctaaagctggggatagccttccagatcatggacgatgtcctcaacctcgagggggac
caggcttacggcaaggagctcgccggggacctctatgagggcaagcgcaccctcatcctg
atccgctacctccaggaagcccccaaggaggaccgcacccgggccgaggccctcttaagc
cttccccgggaggccaagcccgaggccgaggtgcgctggctttggcaaaacctcctggtc
tccggagccgtggcctgggccaaggaggaggccaggcggctggcccaggaggggatgggt
gcccttatttcctacctggacaccctccccggacgggaggccgcctcccatttgcaaaac
ctcctcaccgccctggtggagcgcagggcataa
DBGET
integrated database retrieval system
