Thermus scotoductus: TSC_c05450
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Entry
TSC_c05450 CDS
T01414
Name
(GenBank) acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
tsc
Thermus scotoductus
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsc03000
]
TSC_c05450
Transcription factors [BR:
tsc03000
]
Prokaryotic type
Helix-turn-helix
IclR family
TSC_c05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_20
HTH_36
MarR_2
MarR
DUF5817_CT
Rrf2
DUF4423
HTH_5
HTH_Crp_2
HTH_24
RepL
HTH_34
PadR
HTH_7
dnstrm_HI1420
HTH_26
HTH_23
HTH_11
HTH_3
Dimerisation
SMC_Nse1
Motif
Other DBs
NCBI-ProteinID:
ADW21177
UniProt:
E8PLU2
LinkDB
All DBs
Position
496799..497503
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AA seq
234 aa
AA seq
DB search
MPRPRRKGAEEVKTLERGLSVLQALAELKEAGLSPLAERTGLTKSTLYRLLQTLVRHGFV
EEERGVYRVGPKAFAVGQVYPRQNLLLAAHPEMEALAAETGESVNLAVLAGREALYLDQA
EGARLVRLFTAPGSRAPLHATGVGKVLLAFRGIPEGLSLTPYTPYTLTRLEDLKRELETV
RRKGYALDNEERELGVRCVAAPVFGPGGRWWRPFPCPLLPAAFPWRRLAFWLPG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgccacgacccaggaggaaaggagccgaggaggtgaagaccttggagcggggcctgagc
gtgcttcaggccctggcggagcttaaggaggccgggctttcccccctggcagagcggacg
gggcttaccaagagcaccctctaccgcctcctccagaccctggtccgccatggcttcgtg
gaggaggaaaggggggtttaccgggtggggcccaaggcctttgccgtgggccaggtttat
cccaggcagaacctgcttcttgcggcgcatccggagatggaggccctggcggcggaaacg
ggggagagcgtgaacctggcggtgctggcgggaagggaggccctttacctggaccaggcg
gagggggccagattggtccggctcttcaccgctcccggaagccgggctcccctgcacgcc
acgggggtggggaaggtgcttctcgccttccggggcatccccgaggggctttccctcacc
ccgtacactccttacaccctcacccgcctcgaggacctgaagcgggagctggaaaccgtg
cgccggaagggctacgccctggacaacgaggagagggagctgggggtgcgctgtgtggcc
gctcccgtcttcggccccggggggaggtggtggcggccctttccctgtccgctccttcca
gccgcctttccctggaggaggctcgccttctggctccccgggtaa
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