Thermus scotoductus: TSC_c05580
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Entry
TSC_c05580 CDS
T01414
Symbol
pcrA1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03420
Nucleotide excision repair
tsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TSC_c05580 (pcrA1)
03430 Mismatch repair
TSC_c05580 (pcrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c05580 (pcrA1)
Enzymes [BR:
tsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TSC_c05580 (pcrA1)
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TSC_c05580 (pcrA1)
MMR (mismatch excision repair)
Other MMR factors
TSC_c05580 (pcrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADW21190
UniProt:
E8PM35
LinkDB
All DBs
Position
508461..510587
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AA seq
708 aa
AA seq
DB search
MQGPQSSHPGDELLRSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIAKRGVF
PSEILAVTFTNKAAEEMRERLKRMVKGGGELWVSTFHSAALRILRVYGERVGLKPGFVVY
DEDDQTALIKEVLKELGLAARPGPLKALLDRAKNRGEAPESLLSELPDYYAGLSRGRLLD
VLKRYEEALKAQGALDFGDILLYALRLLEEDPEVLKRVRRRARFIHVDEYQDTNPVQYRF
TKLLAGEEANLMAVGDPDQGIYSFRAADIKNILEFTRDFPGAKVYRLEENYRSTEAILRF
ANALIVNNALRLEKTLRPVKPGGEPVRLYRARDARDEARFVAEEILRLGPPFDRVAVLYR
TNAQSRLLEQTLASRGVPARVVGGVGFFERAEVKDLLAYARLSLNPLDGVSLKRVLNTPP
RGIGPATVEKVEALAREKGLPLFEALRVAAEVLPRPAPLRHFLALMEELQELAFGPAEGF
FRHLLEATDYPAYLREAYPEDYEDRLENVEELLRAAKEAEGLMEFLDKVALTARAEEPGE
PAGKVALMTLHNAKGLEFPVVFVVGVEEGLLPHRSSLSTLEGLEEERRLFYVGVTRAQER
LYLSYAEEREVYGRTEATRPSRFLEEVEGGLYEEYDPYRASAKVSPSPAPGEARASKPGA
YRGGEKVIHPRFGQGTVVAAMGDEVTVHFEGVGLKRLSLKYADLRPVG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggccccaaagtagccatcctggagacgagctccttcgctccctgaacgaagcc
cagcgccaggcggtcttgcactttgagggaccggccctggtggtggcgggggcgggaagc
ggcaagacccgcaccgtggtccaccgggtggcctacctcatcgccaagaggggcgtcttc
ccctcggagatcctggcggtcaccttcaccaacaaggccgccgaggagatgagagagcgc
cttaagcgcatggtgaagggtgggggggagctttgggtttccactttccactccgccgcc
ttgcggattctgagagtctatggggagagggtggggttgaagccggggttcgtggtctac
gacgaggacgaccagactgccctcatcaaagaggtgttgaaggaacttggcctcgccgcc
aggcccgggcccctcaaggcccttctggaccgcgccaagaaccggggggaggcccccgag
tccctgctttcggagcttcccgactactacgccgggctcagccgggggaggcttctggac
gtgctgaagcgctacgaggaggcccttaaggcccaaggggccttggacttcggggacatc
ctcctctatgccctgcgcctcctggaggaggaccctgaggtcttgaagcgggtcaggagg
cgggcccgcttcatccacgtggacgagtaccaggacaccaaccccgtgcagtaccgcttc
accaagctgttggcgggggaggaggccaacctcatggccgtgggggatccggaccagggc
atctactccttccgcgccgcggacatcaagaacatcctggagttcacccgggacttcccc
ggggccaaggtgtaccgcctcgaggagaactaccgctccaccgaggccatcctgcgtttc
gccaacgccctcatcgtgaacaatgccctgcgcctggagaagaccttgaggcccgtgaag
cccggaggggagcccgtgcgcctctaccgggcccgggatgcccgggacgaggcccgcttt
gtggccgaagagatcctgcgtttggggcctcccttcgaccgggtggcggtcctctaccgc
accaacgcccaaagccgcctcctggagcagaccctggcctcccggggggttccagcccgg
gtggtggggggggtggggttctttgaacgggcggaggtgaaggaccttttggcctacgcc
cgcctgagcctgaaccccctggatggggtgagcctgaagcgggtgctgaacacccctccc
cggggcatcggcccggctacggtggagaaggtggaggccctcgccagggagaaggggctt
cccctcttcgaggccctcagggtggcggcagaggttctgccccgccctgctcccttgcgc
cacttcctggccctgatggaggagctccaggaactggcctttggaccggcggagggattt
ttccgccacctcctcgaggccacggactaccccgcttacctgcgggaggcttaccctgag
gattacgaggaccgcctggagaacgtggaggaacttctccgggcggccaaggaggcggag
ggtcttatggagtttctggacaaggtggccctcaccgcccgggcggaggagccgggggag
cccgcgggcaaggtggccctcatgaccctgcacaacgccaaggggctggagtttccggtg
gtcttcgtggtgggggtggaggaagggcttttgccccaccgctcctccctgagcaccctg
gagggcctcgaggaggagcgccgcctcttctacgtgggggtgacccgggcccaggagagg
ctttacctttcctacgccgaggagcgggaggtttacgggcgcacggaggctacccggcca
agccgtttcctggaggaggtggagggagggctttacgaggagtacgacccctaccgggcc
tcggccaaggtttccccctcccctgcccccggtgaagcccgggcctccaagcccggggcc
tataggggtggggagaaggtgatccacccccgtttcggccagggcacggtggtggcggcc
atgggggacgaggtgacggtgcacttcgagggggtgggcctgaagcggctttccctcaag
tacgccgacctgaggcctgtggggtga
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