Thermus scotoductus: TSC_c07340
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Entry
TSC_c07340 CDS
T01414
Name
(GenBank) DNA polymerase III, subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03030
DNA replication
tsc03430
Mismatch repair
tsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TSC_c07340
03430 Mismatch repair
TSC_c07340
03440 Homologous recombination
TSC_c07340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsc03032
]
TSC_c07340
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c07340
Enzymes [BR:
tsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TSC_c07340
DNA replication proteins [BR:
tsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TSC_c07340
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TSC_c07340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_8
RNase_H_2
HisKA
Motif
Other DBs
NCBI-ProteinID:
ADW21361
UniProt:
E8PN10
LinkDB
All DBs
Position
complement(673425..675338)
Genome browser
AA seq
637 aa
AA seq
DB search
MRETLRFLGALLLGLLLVGGTVGLGLFLLLQGEESLKEDLLRLAQAKLPILLFVGFLFTL
VLAALLYPVFLGYLAATRALGQEAEILLANPGHRLRLRGPFELRALADLINRLAQEKEAL
EKEVAARIAEAKSLLEEERKKLAALIGHLPHGVVLANPKGQVLLYNQGARELLGEGLGVG
KSLFGLLDRGLMVHALGLPEERFLTQGPRGPLWLQVVPLEGEEGFLVLLEEAREKGGWDA
ALLHRLKDKLAGLKALAEALDQEARGTPLEPLLKTAKATAEELGQLVASWEAPAQAAEVL
AEDLLALLAQALERETGVSPGFSLEEEARNLLVQADTYALARGLAAALRDEEEAFLEGRR
EGNLLHLTLTLPKSPMSPGDAHPDLPPLLKEAVERSGGSAWWTGSRLHLLLPAREAPRLP
AKAGPPPRAEVFDLSLLHAPEELEEAPLEGLLYTAFDLETTGLDPEKDAIIALGAVHILG
KTVLRHEVFEALVNPGRPIPKASTEVHGLTWEMLKEKPKLEEVLPGFRLFLEDTVLLAHN
GAFDMAFLRRVGIDQPPLVDTLLLSYLLFPDLQDHRLETLAERFGVPVIGRHTALGDALM
TAEVFAGMVPLLRAKGYRTLGEVLRACARLPLARLKY
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaccttgcgctttttgggagcccttcttctgggcctcctcctggtgggggga
accgtgggcctgggccttttcctcctccttcaaggcgaggagagccttaaagaggatctt
cttcgcctggctcaggcaaagctacccatactgcttttcgtgggcttcctcttcaccctg
gtgctggccgccctcctctacccggtcttcctgggctatctggccgccacccgggccctg
ggccaggaggcggagatcctcctggccaaccccggccaccgcctgcgcctccgggggccc
tttgaactcagggccctggcggacctcatcaaccgcctggcccaggaaaaggaggccttg
gaaaaggaggtggcggcgcgcatcgccgaggccaaatccctcctggaggaggagaggaag
aagcttgccgccctcatcggccaccttccccacggggtggtgctggccaaccccaagggc
caggtcctcctctacaaccaaggagcccgggagcttctgggggagggcctgggggtgggc
aaaagcctcttcggcctcctggaccgcgggctcatggtccacgccctgggactgccggag
gagcggtttttaacccaggggcccagagggccgctttggctccaggtggtgcccctggag
ggggaggaagggtttttggtcctcctggaggaggcccgggaaaagggcgggtgggatgcc
gccctcctccaccgcctgaaggacaagctggcggggctcaaggccctggcggaagccttg
gaccaggaggccaggggaacccccctcgagcccctcctcaagaccgccaaggccaccgcc
gaggagctcggccagctggtggcctcctgggaagccccggcccaggcggcggaggtattg
gcggaagaccttttagccctcctggcccaggccctggagcgggaaacaggggtttcccca
gggttctccctggaagaggaagccaggaacctcctggtccaggcggacacctacgccttg
gctcgaggcctggccgccgccttaagggacgaggaggaagccttcctggagggaaggcgg
gaggggaacctgctccacctcaccctcaccctgcccaaatcccctatgagcccaggggat
gcccaccccgaccttccccccctgcttaaggaggcggtcgagaggtccggcgggagcgcc
tggtggacgggatcccgccttcacctcctcctccccgcccgggaagccccccggcttccc
gccaaggcaggccctcccccccgggccgaggtcttcgacctctccctgctccacgccccc
gaggaactggaggaggctcccctggaaggcctcctgtacactgccttcgacctggaaacc
acgggcctggatccggaaaaggacgccatcatcgccctaggggcggtccacatcctgggg
aaaaccgtgctccgccacgaggtgttcgaggccctggtcaaccctggacgccccattccc
aaggcctccaccgaggtccacggcctcacctgggagatgttgaaggaaaagcccaagctg
gaggaggtgctccctgggtttcgcctgttcctggaggacacggtgctcctggcccacaac
ggggcctttgacatggccttcctcaggcgggtggggatcgaccagccccctttggtggat
accctgctcctttcctacctgctcttccccgacctccaggaccaccgcctggaaaccctg
gcggagcgcttcggcgtgcccgtgatcggccggcacaccgccttgggggatgccctcatg
accgcagaggtcttcgccgggatggtccccctcctcagggccaagggctaccgcaccctg
ggggaggtgctcagggcctgcgccaggttgcccctggcccggctcaagtactga
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